Amycolatopsis mediterranei U32: AMED_8024
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Entry
AMED_8024 CDS
T01269
Name
(GenBank) ATPase component of ABC-type dipeptide/oligopeptide/nickel transport system
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMED_8024
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amd02000
]
AMED_8024
Transporters [BR:
amd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AMED_8024
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Paralog
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Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
nSTAND1
AAA_22
AAA_29
AAA_16
AAA_19
ABC_ATPase
TniB
DnaX_C
Motif
Other DBs
NCBI-ProteinID:
ADJ49728
UniProt:
A0A0H3DHW9
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Position
8826323..8828068
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AA seq
581 aa
AA seq
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MSGSVLSISDLSVSFQTEDGVVDAVKGIGFDVQPGEIVAVVGESGSGKSVTSMSVLGLLP
KTSRIAGELRLGERNLADLKEKDMQKIRGNQVAMIFQEPMTALNPVYTVGWQLREALRSH
LDIAKDAADKRAVELLDMVGIPNPDQRFKQYPHQLSGGLRQRVVIAMAIACDPKVIIADE
PTTALDVTVQAEILGLLRKLRDTLDTAIVLITHDMGVVADMADRVIVMYQGEIVEEAPVR
ELFASPKEDYTRRLLAAVPVLGQRPEGRRLLDDTGIASDSTEAARIAEEIRLADAELEAV
IEEAAPALEIKNLVLEYPGRRGQAKNRAVDDVSLTIAKGEIVGLVGESGSGKSTVGRCAV
GLLRATQGTIAIAGKDITTMSAKEIRPLRRFFSIVFQDPASTLDPKMTIGESIAEPMVLH
KVLSGKALSARVRSLLDKVELGGHYMNRYPHELSGGQRQRVAIARALSLDPALLIADEPT
SALDVSVQARVLDLFLDLQQSLQFACLFISHDLAVVDLLADRVAVMQHGKLVEVGTRDQV
LHSPQQEYTKRLLSAAPVADPILQAERRAAWEAGKLAPVAD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggatccgtcctgtccatctccgacctcagcgtgtcgttccagaccgaggacggc
gtcgtggacgccgtcaagggcatcgggttcgacgtgcagcccggcgagatcgtcgccgtg
gtcggggagtccgggtccggcaagtccgtcacgtcgatgtcggtgctgggcctgctgccc
aagaccagccggatcgccggtgagctgcgcctcggcgagcgcaacctggcggatctcaaa
gagaaggacatgcagaagatccgcggcaaccaggtcgcgatgatcttccaggagccgatg
acggcgctgaacccggtctacacggtcggctggcagctgcgcgaggccctgcggtcccac
ctcgacatcgccaaggacgccgccgacaagcgcgcggtcgagctgctcgacatggtcggc
atcccgaacccggaccagcggttcaagcagtacccgcaccagctctcgggcggcctgcgc
cagcgcgtcgtcatcgccatggcgatcgcctgcgacccgaaggtcatcatcgccgacgag
ccgaccacggccctcgacgtcacggtccaggcggagatcctcggcctgctgcgcaagctg
cgggacaccctcgacacggcgatcgtgctgatcacccacgacatgggcgtcgtcgccgac
atggccgaccgcgtcatcgtgatgtatcagggcgagatcgtcgaagaggcgccggtgcgc
gagctgttcgcgtcgccgaaggaggactacacccggcggctgctcgccgcggtgccggtg
ctcggccagcgccccgagggccgccgcctgctcgacgacaccgggatcgcgtccgacagc
accgaggcggccaggatcgccgaggagatccggctggccgacgccgagctggaggccgtg
atcgaggaggccgccccggccctcgagatcaagaacctcgtgctcgagtacccgggccgc
cgcggtcaggccaagaaccgcgccgtcgacgacgtctcgctgaccatcgccaagggcgag
atcgtcggcctggtcggcgagtcgggctcgggcaagtcgacggtcggccgctgcgccgtc
ggcctgctgcgcgcgacccagggcacgatcgcgatcgcgggcaaggacatcacgacgatg
tcggcgaaggagatccgcccgcttcgccggttcttctcgatcgtgttccaggacccggcg
tcgacgctcgacccgaagatgacgatcggcgagtccatcgcggagccgatggtgctgcac
aaggtgctgtccggcaaggccctgtcggcgcgcgtgcgctcgctgctcgacaaggtcgag
ctgggcgggcactacatgaaccgctacccgcacgagctctccggcggccagcgccagcgc
gtggcgatcgcccgcgcgctgtcgctcgacccggcgctgctcatcgcggacgagccgacc
tcggcgctggacgtgtcggtgcaggcgcgcgtgctggacctgttcctggacctgcagcag
tcgctgcagttcgcctgcctgttcatcagccacgacctggcggtggtcgacctgctggcc
gaccgcgtcgcggtgatgcagcacggcaagctggtcgaggtcggcacgcgtgaccaggtg
ctgcactcgccgcagcaggagtacacgaagcgcctgctgtcggcggccccggtcgcggac
ccgatcctgcaggccgagcgccgcgcggcctgggaggccggcaagctggccccggtggcc
gactga
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