Amycolatopsis mediterranei U32: AMED_8058
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Entry
AMED_8058 CDS
T01269
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AMED_8058 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amd03400
]
AMED_8058 (xseB)
Enzymes [BR:
amd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AMED_8058 (xseB)
DNA repair and recombination proteins [BR:
amd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AMED_8058 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
ADJ49761
UniProt:
A0A0H3DGE5
LinkDB
All DBs
Position
8864429..8864650
Genome browser
AA seq
73 aa
AA seq
DB search
MSEAASEELGYEQARDRLVEVVRELEAGGLSLEQSLALWEKGEKLAKVCERHLEGARERI
EAALASVEDDSEQ
NT seq
222 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaagcagccagcgaggaactcgggtacgagcaggcgcgcgaccgcctcgtcgag
gtcgtccgcgagctcgaggccggcggcctgtccctcgagcagtcgctcgcgttgtgggag
aagggcgagaagctcgcgaaggtttgtgagcgtcacctcgaaggcgcccgcgagcggatc
gaagccgccctcgcgtccgtggaggacgactccgaacagtga
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