Amycolatopsis mediterranei U32: AMED_8187
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Entry
AMED_8187 CDS
T01269
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMED_8187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amd03400
]
AMED_8187
Enzymes [BR:
amd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AMED_8187
DNA repair and recombination proteins [BR:
amd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AMED_8187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADJ49885
UniProt:
A0A0H3DG88
LinkDB
All DBs
Position
complement(9011447..9012130)
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AA seq
227 aa
AA seq
DB search
MRSLSELDTAVAGCRACPRLVAWREGVAGTKAAFRGEEYWARPVPGFGPPDASLAVVGLA
PSAHGANRTGRMFTGDPSGDFLFRVLHEVGLASQPTSERLGDGLQLYGTRLVSPVRCAPP
ENKPTPAERDTCRPWLAGELALLRPTLRAIVVLGAFGWQALLPVLEAAGWPVPQPRPAFA
HGAVVELGDLRLFGCYHVSPRNVQTHRVTHAMVADVFRAATSVTGHN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgctgtccgagctggacaccgcggtggccggctgccgcgcgtgcccgcggctg
gtggcctggcgcgagggcgtcgcgggcaccaaggcggccttccgcggcgaggagtactgg
gcgcgcccggtgcccgggttcgggccgccggacgcgtcgctcgccgtcgtcggactggcg
ccctcggcgcacggcgcgaaccgcaccggccggatgttcaccggcgatccatcgggtgat
ttcctgttccgggtcctgcacgaggtcgggctcgcctcgcagccgacgtccgagcggctc
ggtgacggcctccagctctacggcacccggctggtctcgcccgtgcggtgcgcgccgccg
gagaacaagccgacgccggccgagcgggacacctgccgcccatggctggccggggaactc
gcactgttacgtccgacactgcgggcgatcgtcgtgctgggggcgttcggctggcaggcg
ttactgcccgtgctggaggcggccggctggccggtgccgcagccgcgtcccgcgttcgcg
cacggggccgtcgtggaactgggcgacctgcggcttttcggctgttatcacgtctcgccg
cgcaatgtccagacacaccgggtgacccacgccatggtggcggacgtcttccgggccgcg
acctcggtgacagggcacaactga
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