Amycolatopsis mediterranei U32: AMED_8195
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Entry
AMED_8195 CDS
T01269
Name
(GenBank) periplasmic substrate-binding component of ABC-type oligopeptide/dipeptide transport system
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd01501
beta-Lactam resistance
amd02010
ABC transporters
amd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AMED_8195
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMED_8195
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AMED_8195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amd02000
]
AMED_8195
Transporters [BR:
amd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
AMED_8195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF1120
Motif
Other DBs
NCBI-ProteinID:
ADJ49893
UniProt:
A0A0H3DIE2
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All DBs
Position
complement(9019901..9021541)
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AA seq
546 aa
AA seq
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MEGIMRRSRRLWGPTVVMTSLALVLAACGGGSGSTTAGAGETNPDGAVSVYGTEPQNALV
PTNINDLGGTKAIQVMFATLVGFKGADAKPFNLMADSITTTDSKVYDIKIKQGWKFHDGT
EVKAHNFIDAWNYGAYGPNGQLNTDFFSNIQGYKDVHPEDENAKPATDKMSGLVAKGDYE
FQVTLDAPFSVFDIKVGYQAFAPLPDAFFKDPKGFEQHPIGNGPMKFVSRTPNQDIKLTR
NDDYKGDDKVHFKDLDIKIYASQETAYQDLLSGRLDFMEALPPSAVAGGKYKNDLGDRLV
TGHLLGISTIAVPYYVPGYNNLELRKAISMAIDRAQITKTVMNDTYVPADGYISQGIAGA
RPGVCQFCKFDPAAAKEAFQKSGFQGKLTIASNADGGRKEPLVAACNSIKNTLGVECDFV
PATDFGQWRSIVTKKKLTGMGRSDWSADYPSIEDFLNPIYKTGGSSNDSSYSNPQVDALL
GQADATADKDAAVKLYQQAEDLIAKDLPSIPVWDEKGVAAKSKNLKSAALDFRRMPDYPS
IEVLKK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaggggatcatgcgtcgttcgcgcaggctctggggacccacggtggtgatgacctcg
ctggcgctcgtgctggccgcgtgcggtggcggttcgggcagcaccaccgcgggcgccggc
gagacgaacccggacggcgcggtcagcgtctacggcacggaaccacagaacgcgctggtc
ccgaccaacatcaacgacctgggcggcaccaaggcgatccaggtcatgttcgccaccctg
gtcgggttcaagggcgcggacgccaagccgttcaacctgatggccgactcgatcaccacg
accgattccaaggtctacgacatcaagatcaagcagggctggaagttccacgacggcacc
gaggtgaaggcgcacaacttcatcgacgcctggaactacggcgcctacgggccgaacggc
cagctcaacaccgacttcttctcgaacatccaggggtacaaggacgtccaccccgaggac
gagaacgccaagccggccacggacaagatgtccggcctggtcgccaagggcgactacgag
ttccaggtgacgctggacgcgccgttctcggtgttcgacatcaaggtcggctaccaggcg
ttcgcgccgctgcccgatgcgttcttcaaggaccccaagggcttcgagcagcacccgatc
ggcaacgggccgatgaagttcgtctcgcggacgccgaaccaggacatcaagctcacccgc
aacgacgactacaagggtgacgacaaggtccacttcaaggacctcgacatcaagatctac
gccagccaggagaccgcctaccaggacctgctgagcgggcggctcgacttcatggaggcg
ctgccgccgtcggcggtcgcgggcggcaagtacaagaacgacctcggcgaccggctggtc
accggccacctgctcgggatcagcaccatcgccgtgccctactacgtgccggggtacaac
aacctcgagctgcgcaaggccatctcgatggcgatcgaccgcgcgcagatcaccaagacc
gtcatgaacgacacgtacgtgcccgcggacggctacatctcgcagggcatcgcgggtgcg
cgtcccggtgtctgccagttctgcaagttcgacccggcggcggccaaggaggccttccag
aagtccggcttccagggcaagctgaccatcgcgtccaacgcggacggtggccgcaaggaa
ccgctggtcgcggcctgcaacagcatcaagaacaccctcggcgtcgagtgcgacttcgtg
cccgcgaccgacttcggccagtggcgcagcatcgtcaccaagaagaagctgaccggcatg
ggccgctcggactggtccgcggactacccgtccatcgaggacttcctcaaccccatctac
aagaccggtgggtcgtcgaacgactccagctactcgaacccgcaggtggacgcgctcctc
gggcaggcggacgccaccgccgacaaggacgcggcggtcaagctgtaccagcaggccgag
gacctgatcgccaaggacctgccgtcgatcccggtgtgggacgagaagggcgtcgcggcg
aagtcgaagaacctcaagtcggcggccctggacttccggcgcatgccggactacccgtcc
atcgaggtcctgaagaagtag
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