KEGG   Amycolatopsis mediterranei U32: AMED_8390
Entry
AMED_8390         CDS       T01269                                 
Symbol
alkB
Name
(GenBank) alkylated DNA repair protein
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
amd  Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:amd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amd03400]
    AMED_8390 (alkB)
Enzymes [BR:amd01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     AMED_8390 (alkB)
DNA repair and recombination proteins [BR:amd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    AMED_8390 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2
Other DBs
NCBI-ProteinID: ADJ50086
UniProt: A0A0H3DH96
LinkDB
Position
complement(9229185..9229814)
AA seq 209 aa
MMDALLPRPRAEIAPGAVHLPGWLGFDEQRELVAACRGWPGYRHTRLPNGGVMSVKSVCL
GRHWYPYGYSRTTGEGTPVLPFPDWLGDLGRRALTAAYGEPAEAYAPDVALVNFYDATAK
MGLHQDKDERSLEPVVSVSLGDACVFRFGNTETRGRPYTDVELRSGDVFVFGGPSRLAYH
GVPKTLPGTADPALGLAGRLNITLRVSGL
NT seq 630 nt   +upstreamnt  +downstreamnt
gtgatggacgccctcctgccgcgcccgcgcgccgagatcgcgcccggcgccgtgcacctg
cccggctggctcggcttcgacgaacagcgcgagctggtcgcggcctgccgcggctggccc
ggctaccgccacacccggctgcccaacggcggcgtgatgtcggtgaagtcggtctgcctc
ggccggcactggtacccgtacggctactcgcgcacgaccggcgaggggacgccggtgctg
ccgttcccggactggctcggcgacctcggccgccgcgcgctgacggccgcgtacggcgag
ccggccgaggcgtacgcgccggacgtcgcgctggtcaacttctacgacgccaccgccaag
atggggctgcaccaggacaaggacgagcgcagcctcgagccggtggtgtcggtcagcctc
ggtgacgcctgcgtgttccgcttcggcaacaccgaaacccgcggccggccgtacaccgac
gtcgagctgcgttcgggtgacgtgttcgtgttcggcggcccatcccgactggcctaccac
ggcgtgccgaagacgctgccgggcacggcggacccggcgctgggcctggccgggcggctg
aacatcacgctccgggtgtccgggctctag

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