Amycolatopsis mediterranei U32: AMED_8918
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Entry
AMED_8918 CDS
T01269
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd03030
DNA replication
amd03430
Mismatch repair
amd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMED_8918 (dnaX)
03430 Mismatch repair
AMED_8918 (dnaX)
03440 Homologous recombination
AMED_8918 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amd03032
]
AMED_8918 (dnaX)
03400 DNA repair and recombination proteins [BR:
amd03400
]
AMED_8918 (dnaX)
Enzymes [BR:
amd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMED_8918 (dnaX)
DNA replication proteins [BR:
amd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMED_8918 (dnaX)
DNA repair and recombination proteins [BR:
amd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMED_8918 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
DNAX_ATPase_lid
AAA_30
AAA_19
AAA_16
Rad17
AAA_14
AAA_5
Mg_chelatase
DEAD
Motif
Other DBs
NCBI-ProteinID:
ADJ50609
UniProt:
A0A0H3DLL6
LinkDB
All DBs
Position
complement(9768624..9770816)
Genome browser
AA seq
730 aa
AA seq
DB search
MALALYRKYRPATFAEVVGQEHVTEPLRTALSAGRINHAYLFSGPRGCGKTSSARIMARS
LNCAKGPTPDPCGECNSCKALAPEGPGSVDVTELDAASHGGVDDARELRDKAFYAPAESR
YRVFIIDEAHMVTTQGFNALLKIVEEPPEHVIFIFATTEPDKVLTTIRSRTHHYPFRLIP
PSSMRNLLERNIAAEGVEVEPAVYPLVIRAGGGSARDTQSVLDQLLAGAGPEGVSYSRAV
ALLGVTDVALIDDMVDALSAEDSATVFGTVEKLTEAGHDPRRFATDLLDRLRDLVLLRAV
PESAGGLVSAPEEELSRMVAQAERLGLGTLSRYADIVHNGLLEMRGATSPRLVLELLCAR
MLLPSVTDAEKALLARIERLERRATLAGGGGAPAEGGVEPPVRAAPEREFSRPSQRPGSA
GPAPVPEPVKPPGRPAADGGGAARTPVSAPPNEGGGAANTSAPAQPVDGATRTPATVAPA
ASAAETRTGDGGWGAVRTPGGGTPAPVAASAAASSDGGASAPAPEAAAGAPAASGGMDAA
GIRTVWPQLMTALRKFTGGRSLEAMLTQATVASVEGNALTLTHKSEPLARRLSDQDNARK
IAGALTEVLGGDWQVRCVHGNAPAAAAARPQQAAPAPERSFTRQSATAAPPAEPAARPAA
TPPPPPPRPKVTTSEPDIPLPPEPSDEDDEDLYNEDASPAPPPPPPPPDKDPDELARKLL
SEHLGARPLD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
gtggctctcgcgctgtaccgcaagtaccgtccggcaaccttcgccgaggtcgtcgggcag
gagcatgtgaccgaacccctccgcacggcgctgtccgccgggcggatcaaccacgcctac
ctcttctccggcccacgcggctgcggcaagacgtccagcgcgcgcatcatggcgcgctcg
ctgaactgcgccaagggcccgacgccggacccgtgcggcgagtgcaactcgtgcaaggcg
ctcgcacccgaggggccgggcagcgtcgacgtcaccgagctcgacgcggccagccacggt
ggtgtcgacgacgcccgcgagctgcgcgacaaggcgttctacgcaccggccgagtcgcgc
taccgcgtgttcatcatcgacgaggcgcacatggtcaccacacagggcttcaacgccctg
ctgaagatcgtggaagagccgccagagcacgtcatcttcatcttcgccaccaccgagccg
gacaaggtgctgaccaccatccgctcgcgcacgcaccactacccgttccggctgatcccg
ccgagctcgatgcgcaacctcctggagcgcaacatcgcggccgagggcgtcgaggtcgag
ccggcggtgtacccgctggtcatccgggcgggcggcgggtcggcgcgggacacgcagtcg
gtgctcgaccagctgctcgccggcgccgggccggaaggcgtttcgtactcgcgggcggtc
gcgctgctcggcgtcaccgatgtcgccctgatcgacgacatggtcgacgccctctcggcc
gaggactcggccacggtgttcggcacggtcgaaaagctcaccgaggccggccacgacccg
cgccggttcgcgaccgacctgctcgaccggctgcgcgacctggtgctgctgcgcgcggtg
ccggagtccgcgggcgggctggtgtccgcgccggaggaggagctgtcgcggatggtcgcg
caggccgagcggctcggcctcggcaccctctcccgctacgccgacatcgtccacaatgga
cttctggagatgcgcggcgcgacctcgccgcggctcgtgctcgagctgctgtgcgcgcgg
atgctgctgccgtcggtgaccgatgcggagaaggcgctgctggcccggatcgagcgcctg
gagcgccgcgcgacactggccggcggcggaggcgcaccggccgagggtggcgtggagccg
ccggtgcgggcggctccggaacgcgagttttcaaggccttcccagcgcccgggctcggcg
ggcccggccccggtgccggagccggtcaagccgcccgggcgcccggccgccgacggcggg
ggtgccgcgcgtacgcctgtttcggcgccgccgaacgaaggtgggggagccgcgaatacg
tcggctccggcccagccggtcgatggcgccacgcgcactccggccacagtcgcaccggcg
gcttcggcggccgagacccggacgggtgatggcggctggggtgcggtgcgcacgcccggc
ggtggcacgcccgctccggtggcggcgagcgccgccgcgtcttccgatggtggcgcgtcc
gccccggcgccggaagccgcggccggtgcgcccgcggcgtcgggcgggatggatgccgcc
gggatccggaccgtctggccgcagctgatgaccgcgttgcgcaagttcaccggcggccgc
agcctcgaggcgatgctgacgcaggccacggtggcgagcgtcgagggcaacgccttgacg
ctgacccacaagtccgagccgctggcccgccgcctctccgaccaggacaacgcccgcaag
atcgccggcgccctgaccgaagtcctgggcggcgactggcaggtccgctgcgtccacggc
aacgccccggccgcggccgccgcccggccgcagcaggcggcaccggccccggagcggtcg
ttcacgcgccagtcggcgacggccgcgccgcccgccgaaccggcggcccgccccgccgcg
accccgccgccgcccccgccgcggcccaaggtcacgacgagcgagccggacatcccgctg
ccaccggaaccctccgacgaggacgacgaggacctctacaacgaggacgccagcccggcc
ccgccgccgcccccacccccgccggacaaggacccggacgagctggcccgcaaactcctc
tccgagcacctcggcgcccgccccctcgactga
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