Amycolatopsis mediterranei U32: AMED_9155
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Entry
AMED_9155 CDS
T01269
Symbol
clpB
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
amd
Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
amd03110
]
AMED_9155 (clpB)
Chaperones and folding catalysts [BR:
amd03110
]
Heat shock proteins
HSP100
AMED_9155 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
ATPase_2
IstB_IS21
Mg_chelatase
AAA_23
AAA_7
AAA_14
AAA_28
AAA_18
bpMoxR
T2SSE
NACHT
AAA_24
TniB
ABC_tran
AAA_25
AAA_19
NBD_SMAX1
DNA_pol3_delta2
HOOK
FTA4
Mis12
Mod_r
EcoEI_R_C
Motif
Other DBs
NCBI-ProteinID:
ADJ50844
UniProt:
A0A0H3DMD3
LinkDB
All DBs
Position
complement(10002431..10005028)
Genome browser
AA seq
865 aa
AA seq
DB search
MDAFNPTTKTQQAISSAAQAATMAGNPHVSAPHLLGALLAQGEGLTAPLLTAVGADPEVV
HKELEPLIAALPSATGATVSSPQFDTHAVKSLTRAQKLATELGDEYVSTEHLLVGLATEG
GQVADLLKRHGATPDALQEAFAKVRGSARITSADPESTFKALEKYGVDLTARARAGELDP
VIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIIAGDVPESLRGKRVVA
LDLGSMVAGAKYRGEFEERLKAVLKEITDSAGEVVTFIDELHTIVGAGATGEGGAMDAGN
MIKPMLARGELRMVGATTLDEYRQHIEKDAALERRFQQVLVGEPSPEDTIAILRGLKERY
EVHHGVRITDAALVAAATLSDRYITARFLPDKAIDLVDEAASKLRMEIDSRPVEIDEVER
AVRRLEIEEMALAKESDAASKERLANLRAELAEKRETLTALTARWQNEKGSIERVRELKE
QLEQLRGESERAERDGDLGKAAELRYGRIPALEKEFEAATAASEASQQNVMLKEEVGADD
VADVVSAWTGIPAGRLLEGETGKLLRMEEELTRRVIGQAEAVQVVADAVRRARAGVADPD
RPTGSFLFLGPTGVGKTELAKALAEFLFDDERAIQRIDMSEYAEKHSVARLVGAPPGYVG
YDQGGQLTEAVRRRPYSVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILI
LTSNLGSQAIADPSLDERQRRDAVLEVVQRQFKPEFLNRLDDIVVFHSLGTEQLTSIVDI
QIARLAKRLAQRRLNLDVTDSAREWLALNGFDPIYGARPLRRLVQSAIGDKLAKELLSGE
IRDGDTVRVDGPELEAGDALTVTRV
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcaacccgaccacgaagacccagcaggcgatctcgtccgcggcgcaggcg
gccaccatggccggcaacccgcacgtgtcggctccccatctgctgggcgccctgctggcg
cagggtgaggggctgaccgcaccgctgctgaccgcggtcggggccgacccggaagtggtg
cacaaggagctcgagccgctcatcgcggcgctgccgtccgcgaccggcgccaccgtgtcg
agcccgcagttcgacacccacgcggtcaagtcgctgacgcgcgcccagaagctcgccacc
gagctgggcgacgagtacgtctcgaccgagcacctgctcgtcgggctcgccaccgagggc
ggccaggtcgccgacctgctcaagcgccacggtgcgacgccggacgcgttgcaggaggcg
ttcgccaaggtccgcggctcggcccggatcaccagcgcggaccccgagagcacgttcaag
gcgctcgaaaagtacggcgtcgacctcaccgcgcgcgcccgcgccggcgagctcgacccg
gtcatcggccgggacaccgagatccgccgcgtcgtgcaggtgctgtcgcggcgcacgaag
aacaacccggtcctgatcggcgagccgggcgtcggcaagacggccatcgtcgaagggctg
gcccagcgcatcatcgccggggacgtgcccgagtcgctgcgcggcaagcgcgtcgtcgcc
ctcgacctcgggtcgatggtggccggcgcgaagtaccgcggcgagttcgaagagcggctg
aaggccgtgctcaaggagatcaccgactccgcgggcgaggtcgtcaccttcatcgacgag
ctgcacaccatcgtcggcgccggcgcgaccggcgagggcggcgcgatggacgcgggcaac
atgatcaaaccgatgctcgcccgcggtgagctgcggatggtcggcgcgaccacgctcgac
gagtaccgccagcacatcgagaaggacgccgccctggagcggcgcttccagcaggtgctc
gtcggcgagccgtcgccggaggacacgatcgcgatcctgcgcgggctgaaggagcgctac
gaggtgcaccacggtgtccggatcacggatgccgcgctggtcgccgccgcgacgctgtcc
gaccgctacatcaccgcgcgcttcctcccggacaaggcgatcgacctggtcgacgaggcc
gcgtcgaagctgcgcatggagatcgactcgcggccggtggagatcgacgaggtcgagcgg
gccgtgcgccggctcgagatcgaggagatggcgctcgccaaggagagcgacgccgcttcg
aaggagcggctcgccaacctgcgtgccgagctggccgagaagcgcgagacgctgacggcg
ctgaccgcgcgctggcagaacgagaagggctccatcgagcgcgtccgcgagctcaaggag
cagctcgagcagctgcgcggcgagtcggagcgcgccgagcgcgacggcgacctcggcaag
gccgccgagctgcgctacggccggatccccgcgctggagaaggagttcgaagcggccacc
gcggcgagcgaggccagccagcagaacgtcatgctcaaggaggaggtcggcgcggacgac
gtcgcggacgtggtcagcgcgtggaccggcatcccggcgggccggctgctggagggcgag
accggcaagctgctccggatggaggaggagctgacccggcgcgtcatcgggcaggccgaa
gccgtgcaggtggtggcggacgcggtgcgccgcgcccgtgccggcgtcgccgacccggac
cggccgaccggttcgttcctgttcctcggccccaccggcgtcggcaagaccgagctggcc
aaggcgctggccgagttcctgttcgacgacgagcgggcgatccagcggatcgacatgagc
gagtacgccgagaagcattcggtggcgcgcctggtcggtgccccgccggggtacgtcggc
tacgaccagggcggccagctgaccgaggccgtgcggcgccgcccgtactcggtggtcctg
ctcgacgaggtggagaaggcccacccggacgtcttcgacgtgctgctgcaggtcctcgac
gacgggcggctgaccgacggccagggccggacggtggacttccgcaacaccatcctgatc
ctcacctcgaacctcggttcgcaggccatcgccgacccgtcgctcgacgagcggcagcgg
cgggacgcggtgctcgaggtggtgcagcggcagttcaagccggagttcctgaaccggctc
gacgacatcgtcgtgttccactcgctcggcaccgagcagctgacgtccattgtggacatc
cagatcgcccggctcgccaagcggctggcccagcggcggctgaacctggacgtcaccgac
agcgcccgcgagtggctcgcgctcaacggcttcgacccgatctacggcgcccgcccgctg
cggcggctggtccagtcggcgatcggcgacaagctggcgaaggagctgctgtcgggcgag
atccgggacggcgacaccgtgcgtgtcgacggcccggagctggaggccggtgacgcgctg
accgtcacccgggtctga
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integrated database retrieval system
