Apis mellifera (honey bee): 408411
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Entry
408411 CDS
T01057
Name
(RefSeq) transcription factor Sox-2 isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ame
Apis mellifera (honey bee)
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ame03000
]
408411
Transcription factors [BR:
ame03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
408411
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
CSRNP_N
Motif
Other DBs
NCBI-GeneID:
408411
NCBI-ProteinID:
XP_026300481
BEEBASE:
GB50686
UniProt:
A0A7M7SRG9
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Position
LG13:4189927..4280836
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AA seq
506 aa
AA seq
DB search
MLTMETDLKGGSLHGQMPPHQGVSPMGHHTGVSPYGSLGSIVHSPALSGSPPSTGGLGLG
LPHHHQTPQHHYASMQAAQQQQQQQQQQTIHSLAQQNAGQQQQQHQHHPHQPPQQQSQTS
HHQSANNNNNTSKNNNIDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKL
LSETEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKFPLGGGVAGVGGMLGVD
QRQVGGNGGPQQTQLSRDVYQMPNGYMPNGYMMHDPTAAYQQHVAYGSHMGGAAAAAAAS
AAGYPRYDMGHHMGGGSPSPINSYMNGYGGYGSTTVPGGSPSPYHQAQPGSQMSSHSPSG
SSIKSEPTSPASGGIHTPTPTGASSTAAAGGQIVKREYMGQQQTQQTQGDLRQMISMYLP
QGVEQGVVQHGAGVYSPGPSPDPLAQHHTAIPPLTHMAESERKMLNPETGCYSESVRAWY
RYMWKRFDEDRRPNVSSWDSCYSTGN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgatggagacggacctgaagggcggcagcctgcacggtcaaatgccaccgcac
caaggtgtatcgccaatgggccatcataccggagtttcgccttacggcagcctcggctcc
attgtgcacagcccggcattgtctggaagtcctccgagcaccggaggcctgggcctaggc
ttgccgcaccaccatcagaccccgcaacaccactacgcgtcgatgcaggcggcgcagcaa
cagcaacagcaacagcagcaacagacgatacactcgttggcccagcaaaacgccggccaa
cagcagcagcagcaccaacaccaccctcaccaacccccccaacaacagtctcaaacttcc
caccatcaatccgccaacaacaacaacaacaccagcaagaacaacaacatcgatcgcgtg
aaaaggccgatgaacgcgttcatggtgtggtcccgcgggcaacggcgaaagatggcccaa
gagaaccccaagatgcacaactcggagatatcgaagcgtttgggcgccgagtggaaactg
ctgagcgaaacggagaagcgtcccttcatagacgaggcgaaacgattgcgcgccgtccac
atgaaggagcaccccgactacaagtacaggccgcggcgcaagacaaaaaccttgctcaag
aaggataaattccccctcggtggaggagtggcgggcgttggtgggatgttgggtgtggat
caacggcaagtcggcggtaacggcgggccccagcagacccaattgtcgcgcgacgtgtac
caaatgcccaacggctacatgcccaacggatacatgatgcacgatccaacggctgcttat
cagcagcacgtcgcgtacgggagccacatgggcggcgcggcagcggcagcggccgcttcg
gcggccggttatccgaggtacgacatgggccaccacatgggcggcggtagcccgagcccg
ataaacagctacatgaacggttacggtggttacgggagcaccaccgtgccgggtggatcg
ccctcaccttatcatcaagcgcagccgggatctcaaatgtcaagccacagtcccagcggt
agtagtataaaatcggagccgacgagtcccgcgagcggtgggatacacacaccgacgccc
acgggcgcgtcgtcgacggctgccgccggtggccaaatagttaaacgggaatacatgggc
caacaacagacccaacaaactcagggtgatctcaggcaaatgatctccatgtatttgcct
caaggagtggaacagggagtcgtccaacatggcgccggtgtctactcacctggaccatct
cccgatcccttggcgcagcatcacacggcgattccacctctaacgcacatggccgagagt
gagcgcaaaatgttgaatccagaaaccggctgttactcggaatccgttcgggcatggtat
cgatacatgtggaagaggttcgacgaggatcgacgcccgaacgtttcctcctgggattcc
tgttattccacgggaaattag
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