Apis mellifera (honey bee): 408551
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Entry
408551 CDS
T01057
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
ame
Apis mellifera (honey bee)
Pathway
ame04382
Cornified envelope formation
ame04512
ECM-receptor interaction
ame04518
Integrin signaling
ame04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
408551
04518 Integrin signaling
408551
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
408551
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
408551
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ame04147
]
408551
00536 Glycosaminoglycan binding proteins [BR:
ame00536
]
408551
Exosome [BR:
ame04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
408551
Glycosaminoglycan binding proteins [BR:
ame00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
408551
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
408551
NCBI-ProteinID:
XP_006563187
BEEBASE:
GB45943
UniProt:
A0A7M7GSC9
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All DBs
Position
LG16:6992891..7033121
Genome browser
AA seq
1833 aa
AA seq
DB search
MVPRANATRGLRSFPVVLRVTCVLALLVVTWIPVTEAVICRDSYKCNCTGIKGGAGYPGI
PGLQGPEGPPGDIGPDGPPGPKGEKGAGGEYGGMGEKGYRGEQGIQGFPGAAGLPGKPGS
PGVMGPDGLDGCNGTDGRAGSPGIPGVHGERGPPGPMGDYGPIGEPGDGGINSVGVKGVR
GNPGMNGLEGYPGSYGIPGEMGYPGETGDMGFRGSPGLPGMQGDVGDTVYGIKGAEGEQG
DRGEPGPPSNGEFKEKTKVTPVKGATGPKGMRGDAGERGRKGEMGAKGPIGRAGFFGIKG
TKGEQGDDGPRGKQGAEGPPGPAGEKGEKGAPGYAGKPGPDGFDGELGDGGNQGPPGKQG
APGEPGKYIPELDEIIQGNIGIQGDLGPPGNPGEPGTPGLPGKVGYIGPPGPPGPPGSSG
LPGLKGSSVKGEPGDDGFTGEMGLQGPPGAPGIPGTVGLKGYPGLTIVGPPGPDGKPGYP
GVPGLPGDRGDPGVQGPKGFPGKGSRNPGPPGERGLPGIPGLPGPDGWPGLPGLKGVKGF
KGDDCNCPPVKPGPKGEQGDSGLDGYPGTPGYPGLPGPRGFKGVQGKRGIVGPRGLEGDS
GRPGVAGPQGPKGERGRLIVPDKKIIGTPGDIGDKGYPGIEGPTGPRGEPGFRGDTGPEG
PKGEKGELGPPGRPGGDGYPGINGIPGEKGDDASTPMEFLKGEPGSPGIPGLRGPPGDKG
AKGERGISSQYNIQLKGEKGYKGERGDPGEDGAKGPEGWPGDEGFIGPSGIPGSPGISRQ
GPVGLKGYPGMPGDQGPRGAPGTPGSEGFVGFPGRVGNKGDRGDPGSNQTYGDYGLMGWT
GEKGNVGDAGPMGYRGRPGPDGTKGAKGSKGAPGSAGIPGLQGVKGQRGDRVQGSKGMPG
IHGQPGMPGRMGEVGIPGPDGTLGFDGMKGLKGEIGFMGRRGDDGDIGPPGYLGRDGIPG
LPGPPGPDGDVGEIGEPGPRGWLGLEGLSGPMGAKGEQGDVGPVGIPGIVGLPGSKGISG
DPGPVGLDGLPGENAFSGPQGDIGEPGFMGEVGAPGLPGMDGRPGLPGEPGLATDGFNGL
RGEKGEAGINGLNGLPGPKGEIGDMGLDGLKGARGDWGLKGRPGIPGSPGLHAVKGERGP
IGPPGIEGLKGKRGLDGDPGRMGLPGMPGDQGHRGSPGLMGAPGPKGYVGEPGLPSYGEV
EGGDFGMPGLNGLPGEKGERGEQGFVGLPGRKGMKGNIGYRGPDGFPGVPGFPGLPGDEG
PPGFPGISGQFAEPGEDGRPGMDGIPGTPGIPGQKGAPGEYGPNGPIGITGDVGFSIRGP
KGLAGDMGPRGFDGYPGAPGLQGMPSLPGLPGPKGYPGEIGLPGISIKGESGERGLDGFD
GRPGTKGIRGDSGLSGFVGLPGAKGEPGDVGEPGIIGLPGPPGPKGPKGDRGMNPFSPFP
RKGLPGDTGPPGLPGFPGLPGMLGEPGEDGLPGREGEPGMVGLPGLPGPEGEEGPAGYTG
PPGVIGRQGLPGSPGISGNPAPPAPGPRNRGFYFARHSQSEMIPLCPPNTIKLWDGFSLL
HVRANGKSHGQDLGTAGSCVVKFNTMPFTFCNLNNQCNYADREEFSYWLSTTEPMPMSMA
PIPAPQVGRYISRCSVCEAPTRAIAVHSQTMAIPQCPGGWEELWIGYSFLMHRDVGNGGG
GQSLVSPGSCLEEFRIRLFIECRSKGTCNYFSTATTFWLTTIKDYEMFRKPIPQTLKTDH
TSRVSRCVVCLRRRVTEDVKSLKPFISNGQREQVGNIRYSPHSRPVHYPDYQYQKKPPIG
RTRGPNRRVPYHYRKKGGRLRKPERTTEPPEAA
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctagggccaacgcaacccgcgggttacgttcgttcccggttgtcctgcgagtc
acctgcgtccttgccctactcgtcgtcacgtggataccggtcaccgaagctgtgatctgc
agagattcgtacaaatgcaattgcacggggataaaaggtggtgcgggatatcctggaatc
cccggacttcaggggccggaagggccaccgggtgacatcggcccggacggtccacccggg
ccgaaaggtgaaaagggcgccggtggggaatacggcggcatgggagagaaaggttacagg
ggcgagcaaggtatacaaggtttccccggagccgcaggactaccgggtaaaccgggctca
cccggtgtaatgggaccggacggtttggacgggtgcaacgggaccgatggacgtgccggt
tcaccggggatacccggtgtccacggcgaacgcggcccgccgggaccaatgggagattac
gggcccatcggcgaacctggcgacggaggcatcaattccgtgggcgtgaagggggttcga
gggaatcctggcatgaacgggctcgagggttacccaggatcgtacgggatccccggtgaa
atgggttatccaggagagacgggcgacatgggtttccgtggctctcctggattgccgggt
atgcaaggtgacgtgggcgacacggtgtacggtataaagggcgcggagggtgagcaagga
gacaggggcgaacctgggcctccgagtaacggtgagttcaaggaaaaaacgaaggtgacg
ccggtgaagggcgccaccggccccaagggaatgcggggagacgcgggggagcgaggaaga
aagggagaaatgggcgccaaaggacctatcggtcgggcaggattcttcggtatcaaaggt
acgaagggggagcaaggtgacgacggaccaaggggtaagcaaggtgcggagggtccgcca
ggacccgcgggagagaagggagagaagggagcgccgggatacgctggaaaaccgggaccg
gacggatttgacggagaactgggagatgggggaaatcaaggaccaccgggtaaacaagga
gctcctggagaaccaggaaaatacataccggaattggacgaaataattcaaggaaatatc
gggattcaaggagatttaggcccacccggtaatccaggagaaccaggaacaccaggttta
cccggcaaagtaggttatatagggccgcctggtcctccaggaccccccggctcctctggg
ttaccaggattgaaaggatcttccgtaaaaggagagccaggagacgatggttttaccgga
gaaatgggtctgcaaggtcccccgggtgcgccgggtatacctggaaccgttgggcttaaa
ggataccctggattaactatagttggaccaccaggtcccgatggaaaacctgggtatcca
ggtgtgcctggattgcctggagatcggggtgatcccggtgtccaaggtccaaaaggtttt
cctggcaaggggtcgaggaatccgggtcctccgggtgagcgtggtttgccaggtatacca
ggacttcctggacccgatgggtggccaggtttaccaggtctgaaaggcgtgaaaggcttt
aaaggagacgattgcaattgtccgccagtaaaacctgggccgaagggggaacaaggtgat
tctggattggacggatatcccggcacgccgggatatccgggactgcccgggccacgtgga
ttcaaaggggtgcagggcaaacgaggcatcgtcgggccgagaggattggaaggcgacagt
gggaggccaggagtcgccggcccccaaggacccaagggagagagggggcggttgatagtg
cctgacaaaaaaataattggaacgcccggcgacatcggtgacaaaggttaccctggcatc
gaaggaccgacggggccgcgaggagagcctggattccgcggtgacacggggcccgaagga
cccaaaggagagaagggtgagctcggtcctcctggacggccaggcggcgacggttatccc
ggaataaacggtatcccgggcgagaaaggcgacgatgcatcgacgccgatggaatttttg
aaaggtgaacctggttccccgggcattccgggactcagaggtccgccgggtgacaaagga
gcaaagggagagcgcggaatatcctcgcaatacaatatacaactgaaaggggagaaggga
tacaagggggagcgcggtgatccaggggaggacggtgccaaaggtcccgagggatggcca
ggtgacgaaggatttattggaccatcgggaattccaggatctcctggtatatcgcgtcaa
ggacctgtaggtctgaaaggatatcccggtatgccgggagatcaaggtcctcgcggtgcc
cccggcacaccgggttcggaaggatttgtcggttttccgggacgcgtaggtaacaaaggt
gatcgaggggatccgggctcgaatcagacgtacggcgattacggattaatgggttggaca
ggagagaaggggaacgtgggtgatgctggacctatgggttatcgtggtagacctgggcca
gatgggacaaaaggcgcgaaaggaagcaaaggcgctcctggctcggcgggtatacctgga
cttcagggtgttaagggtcaaagaggagacagagttcaaggatctaaaggtatgcctgga
atacatggtcaacctgggatgcctggaagaatgggagaagtcggtattccaggacccgat
ggaacgcttggattcgacggaatgaagggtctgaaaggagaaatcggtttcatggggcgc
agaggtgacgacggtgacatcggaccaccgggttatttgggaagagatggtataccgggt
ctcccaggtccacctggaccggacggagacgtcggtgaaatcggtgaacctggtcctcgt
ggttggcttggtctggaagggctatccgggccaatgggagccaaaggggaacaaggagac
gtcgggccggttggtattccaggtatcgttggattgcccggatcaaaaggtatctctgga
gatcctggaccggtcggtttggacggacttccgggtgaaaatgcgttcagcgggccgcaa
ggcgacataggagagcctggttttatgggagaagttggagctcctggtttgcctggtatg
gatggacgacctggtctgcctggtgaaccaggtttggctaccgatggtttcaatggttta
cgaggagaaaaaggtgaagctggcattaacgggttgaatggattaccggggccaaaagga
gagataggtgatatgggtctggatggtctgaagggagcgagaggagattggggattaaag
ggaaggcctggaatacctggttctccaggtttacatgctgtaaagggtgaacgaggcccg
ataggaccacccggtatcgaggggctcaaaggtaaaagaggattggacggtgatccaggt
cgaatgggtctaccgggaatgcctggtgatcaaggtcatagaggatcacccggtttaatg
ggtgcaccaggacctaaaggatacgttggagaacctggtttaccatcgtacggtgaggtg
gagggaggtgattttggaatgcctgggctcaatggtttaccaggcgaaaagggagaacgg
ggtgaacaaggtttcgttggattacctggaagaaaaggtatgaaaggtaacattgggtac
cgtggacctgatggatttccgggtgtaccaggtttcccaggtcttcctggtgatgaagga
ccgccaggttttccaggaatatctggccaattcgctgaaccaggtgaagatggacgtcct
ggaatggatggaatacctggtactccaggaataccaggtcaaaaaggtgctcccggagaa
tatggacctaatggccccatagggattacaggagacgttggtttcagtattcgtggtccg
aaaggacttgcaggagacatgggtccacgtggtttcgatggttatccaggagctccaggt
ttgcaaggaatgccaagtctgcctggattaccagggccaaaaggttatccaggggagatt
ggattgcctggaatatctatcaaaggagaatcaggagaacgaggattggatggattcgat
ggtagaccaggaacaaagggaataagaggtgattcgggtctttctggattcgtaggactg
cctggggcaaaaggagaacccggtgacgtaggagaacctggtataattggacttcctgga
cctccagggcctaaaggaccgaaaggtgaccgcggtatgaatcccttctcaccgttccca
agaaaaggtttacctggagatacaggaccaccaggattaccaggtttcccgggacttccg
ggaatgttaggcgaaccaggagaagacggattaccaggaagggaaggagagcctggaatg
gtaggtcttccgggccttccaggaccagaaggtgaggaaggtcctgctggttatactggc
ccacctggtgtaattggacgacaaggacttccaggatctcctggaatatcaggaaatcca
gcaccaccggcaccagggcctcgaaacagaggcttctattttgctcgacactcgcaatcc
gagatgataccgttatgcccaccgaacactatcaaactttgggacggtttctcgttgttg
catgtaagagccaatggaaaatctcacggacaagatctcggtacggccggaagctgcgtc
gtaaagttcaacactatgcctttcacgttttgcaacttgaacaatcaatgcaactacgca
gacagagaagagttcagctactggctgagtacgacggaacccatgcctatgtctatggct
ccaataccagcaccccaagttggcagatacatctctagatgttcggtttgcgaggccccg
acccgggcaatagcggttcacagtcaaactatggctataccacagtgtccaggtggttgg
gaagagctatggatcggatatagtttcctcatgcatcgagacgtaggcaatggcggaggt
ggccaatctctagtttctcccggctcctgtttggaagaatttcgcatcaggctgttcatc
gagtgccgtagtaaaggcacgtgcaactatttctccactgccactaccttctggttaacc
accatcaaagattacgagatgttccgtaaaccgattccacaaacactcaagacggatcac
acatcgcgagtaagtcgttgcgttgtctgtcttcgacgtcgcgtaacggaggacgtgaaa
tcgttaaagccattcatatcgaacgggcaaagggagcaagtgggcaatattcgatactcg
cctcattctcggcctgttcactatccggactatcaataccagaaaaaaccaccgatagga
agaacgagaggaccgaacaggcgcgttccgtatcactatcgaaagaaaggtggcagatta
cgtaaaccggaacgaacaacggagccaccagaagcggcttaa
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integrated database retrieval system