KEGG   Apis mellifera (honey bee): 408552
Entry
408552            CDS       T01057                                 
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
ame  Apis mellifera (honey bee)
Pathway
ame04382  Cornified envelope formation
ame04512  ECM-receptor interaction
ame04518  Integrin signaling
ame04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ame00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    408552
   04518 Integrin signaling
    408552
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    408552
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    408552
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ame04147]
    408552
   00536 Glycosaminoglycan binding proteins [BR:ame00536]
    408552
Exosome [BR:ame04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   408552
Glycosaminoglycan binding proteins [BR:ame00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   408552
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 408552
NCBI-ProteinID: XP_392097
BEEBASE: GB45968
UniProt: A0A7M7R5C5
LinkDB
Position
LG16:complement(6976010..6992150)
AA seq 1929 aa
MTRLGLRFVASAVFLAGIASGQYNHTSWSYNPPPVVPLGRGDIGKPNNTDDDYNISPRWK
TFVTNNEGSDEADRRYLSNQGPTDDDRYDYGQRTDDSGGGYHTNYAGFDQGSYNQGREQI
PLDPYNQESGDTYGRSRGYEDSYGREGEGSRGSYGSGYRETYGSRDDYGRVADPYDQRGY
SQRGGGGYGAAGDSDTYPSSYTVVPVPGQIPPRNCTGSACCVPKCFAEKGSRGPPGILGP
QGPKGQRGFPGAEGLLGPKGDKGEPGPQGPRGTKGDRGKMGIPGFTGIAGVPGVQGPPGA
PGIPGRDGCNGTDGEPGARGYPGEVGPRGFRGPPGLKGQKGQPGFAGRFPVGQKGEPGID
GVRGPPGPPGPQGEHGFPGSKGERGPPGPIGLQGQKGEKGNMGLAFEGPKGDKGQKGEIG
PPGTPGPLEPFQGMREEVIAPQGDRGEKGDKGEMGPDGFKGEPGPIGDQGISGSPGMKGE
KGLPGAPGIRGRDGFSGPPGPPGRKGDRGYDGLDGLPGRPGQKGEPGRDGPMGVPGLRGP
PGPPGGGKGTPGPPGPKGPRGFPGPTGPRGADGYPGDPGPRGPIGPAGGPGSQGIPGPEG
LPGEKGAKGEPGITGFPGPTGPRGFDGPPGLPGPRGLPGEKGASLVGPKGMDGAPGLDGE
KGQKGERGYAGPRGVPGDVDGIPGPPGEAGLPGERGTPGKDGTPGFSGAPGEKGDAGFCL
PPPPVFPGPKGDRGLDGTPGLPGPRGPPGERGFPGEPGADGLPGPIGPPGLPGKDGIPGA
AGPQGEPGTPAVITSNMIKTEKGDKGVRGEVGRPGPPGPQGPVGEKGAIGFAGFPGPKGT
AGDRGFPGQDGVPGRPGIPGRKGERGLSVKGEPGEPGRSGQIGLKGEPGSYGQKGEPGQC
PPLDLINSKGDRGAPGEKGEPGPPGRDGLSGDKGLQGFAGPPGPAGQIGPPGPVGPRGLP
GPRGDKGNTGPMGFPGEPGREGPRGFPGAPAQKGEKGEPGISVKGSPGLPGPPGDKGEKG
LPGPPGKDGPIGLQGLPGFVGEKGDTGEPGISGLPGTPGEKGDTGPIGPPGPPGIAGLPG
KDGNKGEPGLPGAGGRAGLPGFPGVKGDRGEPGIDGSKGYPGRRGLPGATGRPGLEGAPG
MKGERGEKGSAGFPGLPGIEGKPGRPGPPGMKGDLGPPGAPGLPGVIGYEGFKGDRGPPG
LPGRKGEPGQVSEKGQKGEPGMPGIRGPPGIPGRNGVDGAKGEPGLPGIGRDGLPGPKGE
PGPPGRDGLPGFQGLKGDAGVRGFPGFKGDIGPIGAPGEPGLPGINGLPGEQGDVGPPGV
PGLPGLEGEMGAPGHPGIPGAKGDRGIPGAVGLPGIPGAIGEKGDRGPPGPTISIKGEKG
EPGIPGLRGAPGEKGDRGLEGLSGYDGEKGDSGAPGPVGNPGPSGLPGAKGDEGPRGPTG
VPGLTIKGEKGLPGMPGKHGREGIPGRPGEKGEQGLPGLPGHKGERGPPGPVGLPGEKGD
MGLMGPPGLTGRDGQPGVKGFPGLPGERGEKGEAGLRGPPGPIGQKGEPGFPGPSGIDGI
PGEKGDRGWDGVSGLPGPVGEKGDRGYPGPVGLMGVVGYVGQKGDKGDDCIEPPMGPKGD
RGFPGPVGPPGPPGEKGIPGPPGFPGSNGVKGAIGLQGPPGPVGLPGLPGPVGAPGLPGL
QGPVGVPGIPGEPGLPCEPASDYLTGILLVKHSQSQLLPVCDAGHIKLWEGYSLLFTDGD
ERAHSQDLGYAGSCVRKFSTMPFLFCDINNVCHYGNRGDRSYWLSTTSPIPMMPVQESEI
EQYISRCVVCEVPANVLAVHSQSLNIPDCPQGWTGLWIGYSFLMHTGAGAQGGGQSLSSS
GSCLEDFRATPFIECNGNKGQCHYYMNEISFWMATIEDRQQFQAPEQQTLKAGNLRSKIS
RCQVCIKNT
NT seq 5790 nt   +upstreamnt  +downstreamnt
atgacccggttgggattgcgattcgtcgcatccgcagtgttcctggccgggatagcgagt
gggcaatataatcatacgtcatggtcgtacaatcctccgcctgttgttcctctcggacgg
ggtgatatcggaaaaccgaacaataccgatgacgattataatatttcaccacgatggaaa
acttttgttacgaataacgaaggttcggatgaagcggacaggcggtacttaagcaatcaa
ggcccgaccgacgatgatcgatacgattacggtcaaagaaccgacgattccgggggagga
tatcacaccaattatgccggcttcgatcaaggatcgtacaatcaaggccgagaacaaatc
cctttggatccttacaatcaagaatctggcgacacttacggaaggtctcgaggttacgag
gactcttacggaagagagggggagggcagcagaggttcttacgggagtggataccgagaa
acttatggatcaagggacgattacggacgcgtagcggatccctacgatcagcgtggatat
tcgcagcgtggaggagggggatacggcgcggctggggattccgacacttatccgagcagt
tacacggttgtaccggtcccgggacagatcccacctcggaattgcaccggatcggcttgc
tgcgtgcccaaatgtttcgcggagaaaggctccagaggaccaccaggtatattgggacca
caggggccgaaagggcagaggggatttccgggcgcggaaggtctgttggggccaaaaggg
gacaaaggtgaacctggtcctcagggaccgcgtggaacgaaaggtgacaggggtaaaatg
ggtatacctggattcactggtatcgctggtgtaccgggggttcaaggtccgcccggggct
ccaggtattccgggtcgtgacggttgcaatggaacagacggtgagcctggtgcgcgaggt
tatcccggagaggtcggtccccgcggttttcgaggtcctcctgggctgaaggggcaaaag
ggtcagccaggtttcgccggcagattccctgtgggtcagaagggtgagcccggtatcgac
ggtgtgagagggcccccgggtccaccgggaccgcaaggagaacacggatttccaggatcg
aagggcgagcgtggcccacctggtccaataggattgcaagggcaaaagggagagaaggga
aatatgggtcttgcgttcgagggtccgaaaggagacaaaggtcagaagggagagatagga
cctcccggaacgcccggccctctggaaccgttccaaggaatgagggaagaagtaatagct
ccgcagggggatcgtggcgaaaaaggagacaagggtgaaatggggccggacggtttcaaa
ggagagccgggtccaatcggagatcaaggtatttctggtagtcctggtatgaagggagag
aaaggtcttccaggggcgccaggtattcgcggtagggatggtttctcgggtcctccgggt
ccacctgggcggaaaggtgatcgaggttacgacggattggacggtcttcccggtcgtcct
ggacagaaaggtgaaccgggacgagacgggccaatgggtgttccaggcttgcgaggacct
cctggtccacccgggggtggaaaaggtacgccgggtccaccggggccgaaagggcctcga
ggttttccggggccgaccgggcctcgtggcgccgacggatacccaggcgatccaggtccc
agaggtcccatagggccagccggagggcccggctcgcaaggtattcccggtccagaaggt
ttgccgggcgagaaaggcgccaagggagagcctgggatcacgggattcccggggccgacg
ggcccacggggattcgacggccctccgggattaccaggtccgcggggattgccgggagag
aaaggcgcctcgctcgtggggcctaaagggatggacggagcgccaggtttggacggagag
aaagggcagaagggggaacgcggttacgcgggaccacgaggagtgccgggcgacgtggac
ggcattccagggccacctggcgaggccggccttcccggcgaacggggaactccggggaaa
gacgggactccagggttctcgggggcgcccggcgaaaaaggagacgcgggcttctgtcta
cctcctcccccggtgtttccagggcctaaaggcgatcgcggtctggacggtacacctggg
cttcccgggcccagaggcccacccggggaacggggattcccaggggaacccggcgcagac
ggattaccagggccgatcggcccaccaggactaccggggaaagatggtattcctggcgcg
gctggtccgcaaggagagcctggaacgccagcggtgattacgtccaacatgattaaaacg
gagaagggcgacaaaggtgtaaggggagaggtgggaaggccaggtccaccgggtccccaa
ggtccagtcggggagaagggcgctataggatttgctggtttcccgggtccaaagggtacc
gctggtgacagaggatttccgggccaagacggggttcctggaaggccaggtattccaggt
cgaaaaggagagcgtggtctgagcgtgaaaggggagcctggagaaccgggccgttcgggt
caaataggtttgaagggtgaacctggttcgtacggacaaaaaggagaacccggccagtgt
ccaccgctcgatttgatcaacagcaagggagacagaggcgcgcctggcgagaagggagag
ccaggcccaccgggcagggacgggttgagcggtgacaaaggtttacaaggattcgcgggt
ccgcctggtcccgctggacaaatcggtccgcctgggccggtagggccgagagggttgccg
ggtccgcgcggcgacaagggtaacacgggtccgatgggtttccccggggaacctggtcgc
gaaggacccagaggattcccgggcgctccagcgcagaaaggagaaaagggcgagcctggg
atatcggtgaagggtagccctggcttgcctggtccaccgggcgacaagggcgagaaaggt
cttcccgggccgccgggaaaagacggtcctatcggtttgcaaggtttgccgggattcgtg
ggggagaagggagacacgggtgagccggggataagcgggttgcccggcacgccaggggag
aaaggagataccggtcccatcgggcctcctggtcctcccggtatcgcgggattacccggc
aaagacggaaacaaaggtgaaccgggattgccgggggcaggtggaagggcgggtcttccg
ggatttccaggcgtgaagggtgatcgaggcgagccgggcatcgacggatcgaaaggttat
ccgggaaggcgtgggttgccgggcgcgactggtagacccggcctggaaggtgcgcctggt
atgaaaggagaacgtggcgagaaagggtcggccgggttccccggattgcccgggatcgaa
gggaaacccggtcgtcctggaccacccgggatgaaaggggacttgggtcctcccggcgct
ccgggcctcccaggtgttataggatacgaaggattcaaaggtgatcgaggtccgccggga
ttaccgggacgtaaaggtgaaccgggtcaggtatcggagaaagggcagaagggtgagccg
ggaatgcctgggatccgcggtcctcccggcatccctggcagaaatggcgtggacggggcg
aaaggagagcctgggttgccaggcatcggccgggatggtctgcctggtcccaagggagag
cccgggccgccaggtcgtgacggtttgccaggattccaaggactgaaaggtgacgctggc
gtgagaggtttccccggttttaaaggagacattggaccgatcggggctcccggcgagcct
ggactgcccggaatcaacggattgccaggtgaacaaggcgacgtcggtccacccggagtt
cctgggttgcccggtttggaaggtgaaatgggggcaccgggacatcctggaatccccggc
gccaaaggggatcgcggtattccaggcgccgttggacttcctggtattcccggggcgatc
ggcgagaaaggcgatcgtggaccgcccggcccgaccatttcgatcaaaggtgaaaaaggc
gaaccgggtattcccggtttacgaggtgcgcctggagaaaagggagatcgcgggttggaa
ggtctgagtggctacgacggcgagaaaggggatagcggcgcgcctggtcccgttggaaat
ccaggtccatccggtctccccggtgctaaaggagacgaaggtccacgcgggcctacggga
gtccctggattgacgatcaagggcgagaaaggtttgccgggtatgcctggaaagcatgga
agggaaggaataccgggacgaccgggagagaaaggggagcaaggattgccaggtttaccg
ggacacaagggagaacgagggccgccaggtccagtcgggttgccgggcgaaaagggtgat
atgggtctcatgggtcctcccggtttaacgggtcgcgatggccaaccaggcgtcaaagga
ttccccggtttgccgggcgagagaggcgagaaaggagaggctggtttacgtggaccaccc
ggtcccattgggcagaagggagaacctggattccctgggccgagcggaatagatggaatt
cccggcgaaaagggcgatagaggttgggatggcgtgagcgggttgccgggtccggtcgga
gagaaaggtgacagagggtatccaggtccggtgggattgatgggcgtggttggatacgtc
ggtcagaaaggcgacaagggtgacgactgcatcgagccaccgatgggaccgaaaggagat
cgcggtttccccggaccggtcggcccgccaggaccaccgggagagaaaggaattccaggc
ccgccagggttcccgggatcgaacggagtgaaaggtgcgatagggcttcaagggccgcca
gggcccgtcggtttgccaggtttgccgggacctgtcggcgcgcctggtttgccgggcctt
caaggaccggtcggtgttccgggtataccgggagaacctggcctaccgtgcgagcccgca
tccgactatcttaccggtatcctgttggtgaaacacagtcaaagtcaattattgcccgtt
tgcgacgccggccacatcaaactctgggaaggatacagtttgctgttcacggatggcgac
gaaagggcgcactcgcaagatttaggttatgccggttcgtgcgtacgaaagttctcgacg
atgccgttcctcttctgcgatataaacaacgtttgccactacggtaatcggggcgatcgt
tcttattggttatccaccactagtccaattcccatgatgcctgtccaggaatcagagata
gaacaatacatctccagatgcgtggtgtgcgaggttccggcaaatgtgttggccgtacac
agtcaatcgttgaatattccagattgtccacaaggatggactggtctttggatcggatac
agttttctcatgcatacgggtgctggtgcccagggaggagggcaatccttgtccagttcc
ggatcctgtctggaagacttccgtgcaacgccgttcatcgagtgcaatggtaataaagga
cagtgtcattattacatgaacgagatcagtttctggatggccaccatcgaagacagacaa
cagttccaagcgcccgagcaacagaccttgaaagcaggaaatctcagatccaaaataagt
cgctgccaagtgtgtataaagaacacgtaa

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