Apis mellifera (honey bee): 408552
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Entry
408552 CDS
T01057
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
ame
Apis mellifera (honey bee)
Pathway
ame04382
Cornified envelope formation
ame04512
ECM-receptor interaction
ame04518
Integrin signaling
ame04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
408552
04518 Integrin signaling
408552
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
408552
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
408552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ame04147
]
408552
00536 Glycosaminoglycan binding proteins [BR:
ame00536
]
408552
Exosome [BR:
ame04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
408552
Glycosaminoglycan binding proteins [BR:
ame00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
408552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
408552
NCBI-ProteinID:
XP_392097
BEEBASE:
GB45968
UniProt:
A0A7M7R5C5
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Position
LG16:complement(6976010..6992150)
Genome browser
AA seq
1929 aa
AA seq
DB search
MTRLGLRFVASAVFLAGIASGQYNHTSWSYNPPPVVPLGRGDIGKPNNTDDDYNISPRWK
TFVTNNEGSDEADRRYLSNQGPTDDDRYDYGQRTDDSGGGYHTNYAGFDQGSYNQGREQI
PLDPYNQESGDTYGRSRGYEDSYGREGEGSRGSYGSGYRETYGSRDDYGRVADPYDQRGY
SQRGGGGYGAAGDSDTYPSSYTVVPVPGQIPPRNCTGSACCVPKCFAEKGSRGPPGILGP
QGPKGQRGFPGAEGLLGPKGDKGEPGPQGPRGTKGDRGKMGIPGFTGIAGVPGVQGPPGA
PGIPGRDGCNGTDGEPGARGYPGEVGPRGFRGPPGLKGQKGQPGFAGRFPVGQKGEPGID
GVRGPPGPPGPQGEHGFPGSKGERGPPGPIGLQGQKGEKGNMGLAFEGPKGDKGQKGEIG
PPGTPGPLEPFQGMREEVIAPQGDRGEKGDKGEMGPDGFKGEPGPIGDQGISGSPGMKGE
KGLPGAPGIRGRDGFSGPPGPPGRKGDRGYDGLDGLPGRPGQKGEPGRDGPMGVPGLRGP
PGPPGGGKGTPGPPGPKGPRGFPGPTGPRGADGYPGDPGPRGPIGPAGGPGSQGIPGPEG
LPGEKGAKGEPGITGFPGPTGPRGFDGPPGLPGPRGLPGEKGASLVGPKGMDGAPGLDGE
KGQKGERGYAGPRGVPGDVDGIPGPPGEAGLPGERGTPGKDGTPGFSGAPGEKGDAGFCL
PPPPVFPGPKGDRGLDGTPGLPGPRGPPGERGFPGEPGADGLPGPIGPPGLPGKDGIPGA
AGPQGEPGTPAVITSNMIKTEKGDKGVRGEVGRPGPPGPQGPVGEKGAIGFAGFPGPKGT
AGDRGFPGQDGVPGRPGIPGRKGERGLSVKGEPGEPGRSGQIGLKGEPGSYGQKGEPGQC
PPLDLINSKGDRGAPGEKGEPGPPGRDGLSGDKGLQGFAGPPGPAGQIGPPGPVGPRGLP
GPRGDKGNTGPMGFPGEPGREGPRGFPGAPAQKGEKGEPGISVKGSPGLPGPPGDKGEKG
LPGPPGKDGPIGLQGLPGFVGEKGDTGEPGISGLPGTPGEKGDTGPIGPPGPPGIAGLPG
KDGNKGEPGLPGAGGRAGLPGFPGVKGDRGEPGIDGSKGYPGRRGLPGATGRPGLEGAPG
MKGERGEKGSAGFPGLPGIEGKPGRPGPPGMKGDLGPPGAPGLPGVIGYEGFKGDRGPPG
LPGRKGEPGQVSEKGQKGEPGMPGIRGPPGIPGRNGVDGAKGEPGLPGIGRDGLPGPKGE
PGPPGRDGLPGFQGLKGDAGVRGFPGFKGDIGPIGAPGEPGLPGINGLPGEQGDVGPPGV
PGLPGLEGEMGAPGHPGIPGAKGDRGIPGAVGLPGIPGAIGEKGDRGPPGPTISIKGEKG
EPGIPGLRGAPGEKGDRGLEGLSGYDGEKGDSGAPGPVGNPGPSGLPGAKGDEGPRGPTG
VPGLTIKGEKGLPGMPGKHGREGIPGRPGEKGEQGLPGLPGHKGERGPPGPVGLPGEKGD
MGLMGPPGLTGRDGQPGVKGFPGLPGERGEKGEAGLRGPPGPIGQKGEPGFPGPSGIDGI
PGEKGDRGWDGVSGLPGPVGEKGDRGYPGPVGLMGVVGYVGQKGDKGDDCIEPPMGPKGD
RGFPGPVGPPGPPGEKGIPGPPGFPGSNGVKGAIGLQGPPGPVGLPGLPGPVGAPGLPGL
QGPVGVPGIPGEPGLPCEPASDYLTGILLVKHSQSQLLPVCDAGHIKLWEGYSLLFTDGD
ERAHSQDLGYAGSCVRKFSTMPFLFCDINNVCHYGNRGDRSYWLSTTSPIPMMPVQESEI
EQYISRCVVCEVPANVLAVHSQSLNIPDCPQGWTGLWIGYSFLMHTGAGAQGGGQSLSSS
GSCLEDFRATPFIECNGNKGQCHYYMNEISFWMATIEDRQQFQAPEQQTLKAGNLRSKIS
RCQVCIKNT
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccgcagtgttcctggccgggatagcgagt
gggcaatataatcatacgtcatggtcgtacaatcctccgcctgttgttcctctcggacgg
ggtgatatcggaaaaccgaacaataccgatgacgattataatatttcaccacgatggaaa
acttttgttacgaataacgaaggttcggatgaagcggacaggcggtacttaagcaatcaa
ggcccgaccgacgatgatcgatacgattacggtcaaagaaccgacgattccgggggagga
tatcacaccaattatgccggcttcgatcaaggatcgtacaatcaaggccgagaacaaatc
cctttggatccttacaatcaagaatctggcgacacttacggaaggtctcgaggttacgag
gactcttacggaagagagggggagggcagcagaggttcttacgggagtggataccgagaa
acttatggatcaagggacgattacggacgcgtagcggatccctacgatcagcgtggatat
tcgcagcgtggaggagggggatacggcgcggctggggattccgacacttatccgagcagt
tacacggttgtaccggtcccgggacagatcccacctcggaattgcaccggatcggcttgc
tgcgtgcccaaatgtttcgcggagaaaggctccagaggaccaccaggtatattgggacca
caggggccgaaagggcagaggggatttccgggcgcggaaggtctgttggggccaaaaggg
gacaaaggtgaacctggtcctcagggaccgcgtggaacgaaaggtgacaggggtaaaatg
ggtatacctggattcactggtatcgctggtgtaccgggggttcaaggtccgcccggggct
ccaggtattccgggtcgtgacggttgcaatggaacagacggtgagcctggtgcgcgaggt
tatcccggagaggtcggtccccgcggttttcgaggtcctcctgggctgaaggggcaaaag
ggtcagccaggtttcgccggcagattccctgtgggtcagaagggtgagcccggtatcgac
ggtgtgagagggcccccgggtccaccgggaccgcaaggagaacacggatttccaggatcg
aagggcgagcgtggcccacctggtccaataggattgcaagggcaaaagggagagaaggga
aatatgggtcttgcgttcgagggtccgaaaggagacaaaggtcagaagggagagatagga
cctcccggaacgcccggccctctggaaccgttccaaggaatgagggaagaagtaatagct
ccgcagggggatcgtggcgaaaaaggagacaagggtgaaatggggccggacggtttcaaa
ggagagccgggtccaatcggagatcaaggtatttctggtagtcctggtatgaagggagag
aaaggtcttccaggggcgccaggtattcgcggtagggatggtttctcgggtcctccgggt
ccacctgggcggaaaggtgatcgaggttacgacggattggacggtcttcccggtcgtcct
ggacagaaaggtgaaccgggacgagacgggccaatgggtgttccaggcttgcgaggacct
cctggtccacccgggggtggaaaaggtacgccgggtccaccggggccgaaagggcctcga
ggttttccggggccgaccgggcctcgtggcgccgacggatacccaggcgatccaggtccc
agaggtcccatagggccagccggagggcccggctcgcaaggtattcccggtccagaaggt
ttgccgggcgagaaaggcgccaagggagagcctgggatcacgggattcccggggccgacg
ggcccacggggattcgacggccctccgggattaccaggtccgcggggattgccgggagag
aaaggcgcctcgctcgtggggcctaaagggatggacggagcgccaggtttggacggagag
aaagggcagaagggggaacgcggttacgcgggaccacgaggagtgccgggcgacgtggac
ggcattccagggccacctggcgaggccggccttcccggcgaacggggaactccggggaaa
gacgggactccagggttctcgggggcgcccggcgaaaaaggagacgcgggcttctgtcta
cctcctcccccggtgtttccagggcctaaaggcgatcgcggtctggacggtacacctggg
cttcccgggcccagaggcccacccggggaacggggattcccaggggaacccggcgcagac
ggattaccagggccgatcggcccaccaggactaccggggaaagatggtattcctggcgcg
gctggtccgcaaggagagcctggaacgccagcggtgattacgtccaacatgattaaaacg
gagaagggcgacaaaggtgtaaggggagaggtgggaaggccaggtccaccgggtccccaa
ggtccagtcggggagaagggcgctataggatttgctggtttcccgggtccaaagggtacc
gctggtgacagaggatttccgggccaagacggggttcctggaaggccaggtattccaggt
cgaaaaggagagcgtggtctgagcgtgaaaggggagcctggagaaccgggccgttcgggt
caaataggtttgaagggtgaacctggttcgtacggacaaaaaggagaacccggccagtgt
ccaccgctcgatttgatcaacagcaagggagacagaggcgcgcctggcgagaagggagag
ccaggcccaccgggcagggacgggttgagcggtgacaaaggtttacaaggattcgcgggt
ccgcctggtcccgctggacaaatcggtccgcctgggccggtagggccgagagggttgccg
ggtccgcgcggcgacaagggtaacacgggtccgatgggtttccccggggaacctggtcgc
gaaggacccagaggattcccgggcgctccagcgcagaaaggagaaaagggcgagcctggg
atatcggtgaagggtagccctggcttgcctggtccaccgggcgacaagggcgagaaaggt
cttcccgggccgccgggaaaagacggtcctatcggtttgcaaggtttgccgggattcgtg
ggggagaagggagacacgggtgagccggggataagcgggttgcccggcacgccaggggag
aaaggagataccggtcccatcgggcctcctggtcctcccggtatcgcgggattacccggc
aaagacggaaacaaaggtgaaccgggattgccgggggcaggtggaagggcgggtcttccg
ggatttccaggcgtgaagggtgatcgaggcgagccgggcatcgacggatcgaaaggttat
ccgggaaggcgtgggttgccgggcgcgactggtagacccggcctggaaggtgcgcctggt
atgaaaggagaacgtggcgagaaagggtcggccgggttccccggattgcccgggatcgaa
gggaaacccggtcgtcctggaccacccgggatgaaaggggacttgggtcctcccggcgct
ccgggcctcccaggtgttataggatacgaaggattcaaaggtgatcgaggtccgccggga
ttaccgggacgtaaaggtgaaccgggtcaggtatcggagaaagggcagaagggtgagccg
ggaatgcctgggatccgcggtcctcccggcatccctggcagaaatggcgtggacggggcg
aaaggagagcctgggttgccaggcatcggccgggatggtctgcctggtcccaagggagag
cccgggccgccaggtcgtgacggtttgccaggattccaaggactgaaaggtgacgctggc
gtgagaggtttccccggttttaaaggagacattggaccgatcggggctcccggcgagcct
ggactgcccggaatcaacggattgccaggtgaacaaggcgacgtcggtccacccggagtt
cctgggttgcccggtttggaaggtgaaatgggggcaccgggacatcctggaatccccggc
gccaaaggggatcgcggtattccaggcgccgttggacttcctggtattcccggggcgatc
ggcgagaaaggcgatcgtggaccgcccggcccgaccatttcgatcaaaggtgaaaaaggc
gaaccgggtattcccggtttacgaggtgcgcctggagaaaagggagatcgcgggttggaa
ggtctgagtggctacgacggcgagaaaggggatagcggcgcgcctggtcccgttggaaat
ccaggtccatccggtctccccggtgctaaaggagacgaaggtccacgcgggcctacggga
gtccctggattgacgatcaagggcgagaaaggtttgccgggtatgcctggaaagcatgga
agggaaggaataccgggacgaccgggagagaaaggggagcaaggattgccaggtttaccg
ggacacaagggagaacgagggccgccaggtccagtcgggttgccgggcgaaaagggtgat
atgggtctcatgggtcctcccggtttaacgggtcgcgatggccaaccaggcgtcaaagga
ttccccggtttgccgggcgagagaggcgagaaaggagaggctggtttacgtggaccaccc
ggtcccattgggcagaagggagaacctggattccctgggccgagcggaatagatggaatt
cccggcgaaaagggcgatagaggttgggatggcgtgagcgggttgccgggtccggtcgga
gagaaaggtgacagagggtatccaggtccggtgggattgatgggcgtggttggatacgtc
ggtcagaaaggcgacaagggtgacgactgcatcgagccaccgatgggaccgaaaggagat
cgcggtttccccggaccggtcggcccgccaggaccaccgggagagaaaggaattccaggc
ccgccagggttcccgggatcgaacggagtgaaaggtgcgatagggcttcaagggccgcca
gggcccgtcggtttgccaggtttgccgggacctgtcggcgcgcctggtttgccgggcctt
caaggaccggtcggtgttccgggtataccgggagaacctggcctaccgtgcgagcccgca
tccgactatcttaccggtatcctgttggtgaaacacagtcaaagtcaattattgcccgtt
tgcgacgccggccacatcaaactctgggaaggatacagtttgctgttcacggatggcgac
gaaagggcgcactcgcaagatttaggttatgccggttcgtgcgtacgaaagttctcgacg
atgccgttcctcttctgcgatataaacaacgtttgccactacggtaatcggggcgatcgt
tcttattggttatccaccactagtccaattcccatgatgcctgtccaggaatcagagata
gaacaatacatctccagatgcgtggtgtgcgaggttccggcaaatgtgttggccgtacac
agtcaatcgttgaatattccagattgtccacaaggatggactggtctttggatcggatac
agttttctcatgcatacgggtgctggtgcccagggaggagggcaatccttgtccagttcc
ggatcctgtctggaagacttccgtgcaacgccgttcatcgagtgcaatggtaataaagga
cagtgtcattattacatgaacgagatcagtttctggatggccaccatcgaagacagacaa
cagttccaagcgcccgagcaacagaccttgaaagcaggaaatctcagatccaaaataagt
cgctgccaagtgtgtataaagaacacgtaa
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