Apis mellifera (honey bee): 408794
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Entry
408794 CDS
T01057
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ame
Apis mellifera (honey bee)
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ame03041
]
408794
03016 Transfer RNA biogenesis [BR:
ame03016
]
408794
Enzymes [BR:
ame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
408794
Spliceosome [BR:
ame03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
408794
Transfer RNA biogenesis [BR:
ame03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
408794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
408794
NCBI-ProteinID:
XP_392325
BEEBASE:
GB44037
UniProt:
A0A7M7R4Q3
LinkDB
All DBs
Position
LG4:11168834..11172312
Genome browser
AA seq
733 aa
AA seq
DB search
MTAFEEMGVLPEIGKAVDEMEWTLPTDVQAEAVPLILGGGDVLMAAETGSGKTGAFCLPV
LQIVWETLKDLESGKMSSSSSGHHQPSAHWALSLFDRGRALAVTPDGLRCQSREQKEWHG
CRANKGIQGKDKYFFEAIVTDEGLCRVGWSTSQASLDLGTDKFGFGYGGTGKKSNAKQFD
NYGKSFGMHDVIGCLLNLSKGEISFTLNGADLGPAFTLNAQQKSQTFYPAVVLKNAEMSF
NFGAQPFKYPPPNDYIAVASAPKEAIRENSINSNQTQSKEDGKPKCNAPQAIIMEPSREL
AEQTYNQIQKFKKYLKDPVIRELLVIGGVSVKEQISVLNSGVDIIVGTPGRLEDLIQGGY
LSLTHCRFFILDEADGLLKQGYTELIDRLHRQIPKITSDGKRLQMIVCSATLHAFEVKKM
AERLMHFPTWVDLKGEDAVPETVHHVVVIVDPQKDKSWHNLRKCIETDGVHSRDNIRPGN
NNPETLSEAVKILKGEYCIRAIKEHNMDRAIIFCRTKLDCDNLERYLKQSGGSQFSCVCL
HGDRKPAERKSNLEKFKRQDVKFLICTDVAARGLDISGLPFMINITLPDEKSNYVHRIGR
VGRAERMGLAISLVSKVPEKVWYHGEWCSSRGRNCYNTNLTDKGGCCIWYNEPNYLAEIE
DHLNITIQQVDPDMKVPMNDFDGKVIYGEKRAAMGSNYQNHVQQMAPYVSQLSSLESKAQ
IWYLKRHLVKTAN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacggcatttgaagaaatgggtgtcttacctgaaattggaaaggcagttgatgaaatg
gaatggacattaccaactgatgtccaagctgaagcagttccattaattttgggtggtgga
gatgtattaatggctgcagaaactggtagtggaaaaactggtgcattttgtttaccagtt
ttgcaaattgtatgggaaactctaaaagatttagagtctggtaaaatgagcagtagttct
agtggtcatcatcaaccttctgcacattgggcattaagtttatttgatagaggtagagca
ttagctgtaactcctgatggtttaagatgtcaaagtcgtgaacagaaagaatggcatggt
tgtagagcaaataaaggaattcaagggaaagacaaatatttttttgaagctatagtaact
gatgaaggattatgtcgtgtaggctggtctacatctcaagcttcattagatttaggaaca
gataaatttggttttggttatggtggaactggtaaaaaatcaaatgcaaagcagtttgat
aattatggaaaatcttttggaatgcatgatgtaattggatgtcttctgaacttatcaaaa
ggtgaaattagtttcacattaaatggagcagacttaggtccagcatttacattaaatgca
caacaaaagtcacagactttttatccagctgtggtattgaaaaatgcagaaatgtcattt
aattttggagcacaaccatttaaatatcctcctccaaatgattatatagctgttgcttcg
gcacctaaagaagctataagagaaaattctataaatagtaaccaaactcaaagcaaagaa
gatggcaaacctaaatgtaatgctcctcaagctataatcatggaaccttcaagagaactt
gcagaacaaacctataatcaaatacaaaaatttaaaaaatatttgaaagatccagttatt
agagaattgttggttattggcggagttagtgtaaaagagcaaatttctgtattaaattca
ggtgtagatataatagttggaacaccaggacgtctagaagatttaatacaaggtggctat
ttgtctttaacacattgcagattctttattttagatgaagctgatggtctattaaaacaa
ggttatacggaattaatcgatcgtttgcacagacagataccaaaaattacatcagatgga
aaaagattgcagatgattgtttgttctgcaactctacatgcttttgaagtaaaaaagatg
gcggaacgtttaatgcattttccaacatgggtagatttgaaaggtgaagatgcagttccc
gaaacggtgcatcatgttgttgtaatagtagatccacaaaaagataaatcttggcataat
ttacgaaaatgtatagaaactgatggtgtccatagtagagataatataagacccggaaat
aacaaccctgaaacactttcagaagctgtaaaaatattaaaaggcgaatactgtattcgt
gccatcaaggagcataatatggacagagccattatattctgtagaactaaattagattgc
gataatttggaacgatatttgaaacaatctggtggaagccaattttcatgcgtatgtttg
catggcgaccgaaagcctgcagaacgtaaatctaatttagagaaattcaaaagacaagat
gtaaaatttttaatatgtaccgatgttgcagctagaggattagatatttcaggattacct
ttcatgattaacataactctacctgatgaaaaatcaaactatgtacatcgtataggtaga
gttggtagagctgaacgaatgggtctagccatttcgttagttagtaaagttcctgaaaaa
gtatggtatcacggtgaatggtgttcttctcgtggacgaaattgttacaatactaatctt
actgataagggtggttgttgcatttggtacaatgaaccgaactatttagctgaaattgaa
gatcatttaaatatcacaattcaacaagttgatccagatatgaaagttccaatgaatgat
ttcgatggaaaagttatatatggagaaaaaagagcggcaatgggttccaattatcaaaat
catgttcagcaaatggcgccttacgtgtcccaattatcctctttggaatctaaagcacaa
atttggtatctaaaaagacatttggtgaaaacggcgaattaa
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