Apis mellifera (honey bee): 408815
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Entry
408815 CDS
T01057
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ame
Apis mellifera (honey bee)
Pathway
ame03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
408815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ame03400
]
408815
DNA repair and recombination proteins [BR:
ame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
408815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
Motif
Other DBs
NCBI-GeneID:
408815
NCBI-ProteinID:
XP_392346
BEEBASE:
GB49537
UniProt:
A0A7M7R310
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Position
LG4:complement(5220864..5227350)
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AA seq
1129 aa
AA seq
DB search
MSKVNTLYNYFTSPKTPKTPKQSNNKQISDEKPTTPKRARGQLNKVKTPSKGKENKNLED
RKRIYKDDEEEEKEESEPIQTKKRRLIIPDEESGEDSGDEFKPDLDDESEESDSVSEGVS
ESEPPTASEEETPEKKRKIVNSFGKKPQKGAKKNFKEDKKESKVQQQNQSQGSNNVIDSW
PHLKYDFLQPNKIRDINKKSPNDSDYDPKTLYVPLDFLNQQTPAMRQWWELKSKHFDCVL
FFKLGKFYELYHMDAVIGVNELHLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQ
TENPDMMAQRVSNMIRPTKFDKVVKREICQITSKGTRVYTPQDIEPSTPNSNYLLSVIEK
CPSGSNISHYGVCFLDTTIGDFYLGQFEDDRCNSRLLTLLAHYPPVHVVYERGNLSQKTL
QIFNNNLAACIKESLLRESQFWSSSTTLKNLHEGDYFKKSDSEFQWPTGLQSYLNKSDSL
GLTPAEDKELAVHALGGCIYLLKEYLLEQQLLAQGRFKTYIPPDFSNKTFEASKFANNMV
LDAITINNLRIFGEGSLIKTLDRCCTAFGKRLLREWICRPSCRKDVIIERQEAIQELMNH
SEAVQTTRSILAGLPDLERLLSKIHAQGNPAKQNNHPDGRAIMFEGQTYSKKRITDFITT
LNGFEDVLKIIALFEDFCSTLISKCCKVEPDGEFPSLRESLDYFKTAFDHEEAKKVGCIV
PKKGVDSEYDSVLMELEEIKKDSEQYLEKQKKHFGVKITFHGSDKKRYQIEIPDSQTKKV
GAGFELQSQRKGYKRYYTAESKELLSRQINAEEHRDKVLKDLNRRIFAQFSEKYDMWSMA
VYKLSVLDVLISLTEYAFSGDMCIPEINDGTNEKIFIDIRDGRHPCIISDTFIPNDTLLA
TENFASFMILTGPNMGGKSTLMRQVALLTIMAQIGSYVPASSCRLTLVDRIFTRLGANDD
ILAGQSTFLVELSETSAILQHATPYSLVLLDELGRGTSTYDGTAIAAAVVNALTKLNCRT
LFSTHYHSLVEDYKNNKKITLAHMACMVENEEQDKVSQETVTFLYKLSEGACPKSYGFNA
ARLGGVPAVITSRAHEISKKLEQETNRKHFFITLCKANGSTIRDLIAAM
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagtgaatacattatataattattttacatcgcctaaaactcctaaaacacct
aaacaatcaaataataaacagatatccgatgaaaaacctacaacaccgaaaagagcaagg
ggacaattgaacaaagttaaaactccaagtaaagggaaagaaaataagaatcttgaagat
agaaaaagaatatacaaagatgatgaagaagaagaaaaggaagaaagtgaaccaattcaa
acaaaaaagcgaagattaattattcctgatgaagaatctggagaagattctggagatgaa
tttaaacctgacctagatgatgaatcagaagaatcagattcagtatctgaaggagttagt
gaaagtgaaccaccaaccgcaagtgaagaagaaactccagagaaaaaacggaagattgtt
aattcttttgggaaaaaaccacaaaaaggtgcaaagaaaaatttcaaagaagataaaaaa
gaatcaaaagttcaacaacaaaatcaatcccaaggttcaaataatgttatagattcttgg
ccacacttaaagtatgattttcttcaaccaaataaaatacgagatattaataaaaaatca
ccaaatgattcagattatgatcctaaaactctatatgttcctttggattttttgaatcaa
caaactccagctatgagacaatggtgggaattgaaaagtaaacattttgattgtgttctt
ttctttaagctaggaaaattttatgaattatatcatatggatgctgtaataggtgttaat
gaacttcatcttacctacatgagaggagaatttgcacattcgggatttcctgaaattgga
tatggccgtttttcagcgagtctcatagaaagaggatacaaagtggccagagtagaacaa
acagagaatccagatatgatggcacaacgagttagcaatatgattagaccaacaaaattt
gataaagtagttaaaagagaaatatgccaaataacttctaaaggtacaagagtgtacact
ccacaagatatagaaccatctacacccaattctaattatttattatcagtgattgaaaaa
tgcccatctggttctaacatatctcattatggagtttgtttcttagatactacaatagga
gatttttatcttggtcaatttgaagatgatcgatgtaattctagattattaactttactt
gctcattatcctccagttcatgttgtttatgaacgtggtaatttgtctcaaaaaacgtta
caaatttttaacaataatttagcagcatgtattaaagaatcacttttacgcgaatctcaa
ttttggtcatcttcgactacattaaaaaatcttcatgaaggagattattttaaaaaatca
gattccgaatttcaatggcctacaggcttacaatcatatcttaataaaagtgatagttta
ggtttaactcctgctgaagataaagaattagcggtacatgctttaggtggatgtatatat
ttactcaaagaatatctgcttgaacaacaattattggcacaaggacgttttaaaacatat
attcctccagatttttcaaataaaacatttgaagcttctaaatttgcaaataatatggtt
ttagatgctatcacgattaataatttgagaattttcggggaaggttctcttataaaaacg
ctagatcgttgttgtaccgcatttggaaagagattgttgcgagaatggatttgtagacca
tcttgccgaaaagatgttataattgaacgtcaagaagctatacaagaattaatgaatcat
tcagaagcagtacaaactactcgtagtatattagcagggcttcctgatcttgaaagatta
ttgagcaagattcatgctcaaggaaatccagcaaaacaaaataatcatcctgatggcaga
gctattatgtttgaggggcaaacttattcaaagaaaagaattacagattttattaccact
ttgaatggttttgaagatgtcttaaaaataattgctttgtttgaagatttctgtagcacc
ttaataagcaaatgttgtaaagtggaaccagatggtgaatttccttcattaagagaatct
ttagattattttaagactgcattcgaccatgaagaagccaaaaaagtaggttgtattgtt
ccaaagaaaggagttgattctgaatatgattccgttttaatggaacttgaggaaataaag
aaagattcagaacaatatcttgaaaagcaaaaaaaacactttggagtgaaaattacgttt
cacggttcggataaaaagcgttatcagatcgagattccagattctcaaacgaaaaaagtt
ggtgctggatttgaacttcaatcacaaagaaaaggatacaaacgttattacaccgcagag
tcaaaggaacttttaagtcgacaaataaatgccgaagaacatagagataaagtattgaag
gatttaaatagaagaatatttgcacagtttagcgaaaaatatgatatgtggagtatggca
gtttataaattgtctgttttagatgttcttatttctttaacagaatatgctttcagtggt
gatatgtgtataccggaaattaatgatggtacaaatgaaaagatatttattgatattcga
gatggacgacatccatgtattatttcagatacatttataccaaatgacactttattagca
actgaaaattttgcttctttcatgattctcactgggccaaatatgggcggtaaatcaaca
ttgatgcgtcaagttgcccttctcactataatggcacaaattggaagttatgttcctgca
agttcctgtcgtttaacattagtagatcgtattttcacgagattgggagcaaatgacgat
attttggcaggtcaaagtacattcttagtagaattaagcgaaacttctgcaatattacag
catgctacaccatattctctcgtattactcgatgaattaggacgtggtacatcaacatat
gatggcacggcaattgctgctgcagttgtaaatgcacttacaaaattaaattgtcgtact
ttattctcgacgcattatcattctttggtagaagattataaaaataataaaaaaattaca
ttagctcatatggcttgcatggtagaaaatgaggaacaagataaagtatctcaagaaaca
gtaacatttttatacaaactcagcgaaggagcttgtccaaaatcgtatggtttcaacgct
gcccgattaggtggtgttccagctgtaattacaagtagagcacatgagatttcaaagaaa
ctcgaacaagaaacaaatcgaaaacacttctttattactttgtgtaaagcgaatggttca
actataagggatctaattgctgcaatgtga
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