KEGG   Apis mellifera (honey bee): 408815
Entry
408815            CDS       T01057                                 
Name
(RefSeq) probable DNA mismatch repair protein Msh6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
ame  Apis mellifera (honey bee)
Pathway
ame03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ame00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    408815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ame03400]
    408815
DNA repair and recombination proteins [BR:ame03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     408815
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_22
Other DBs
NCBI-GeneID: 408815
NCBI-ProteinID: XP_392346
BEEBASE: GB49537
UniProt: A0A7M7R310
LinkDB
Position
LG4:complement(5220864..5227350)
AA seq 1129 aa
MSKVNTLYNYFTSPKTPKTPKQSNNKQISDEKPTTPKRARGQLNKVKTPSKGKENKNLED
RKRIYKDDEEEEKEESEPIQTKKRRLIIPDEESGEDSGDEFKPDLDDESEESDSVSEGVS
ESEPPTASEEETPEKKRKIVNSFGKKPQKGAKKNFKEDKKESKVQQQNQSQGSNNVIDSW
PHLKYDFLQPNKIRDINKKSPNDSDYDPKTLYVPLDFLNQQTPAMRQWWELKSKHFDCVL
FFKLGKFYELYHMDAVIGVNELHLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQ
TENPDMMAQRVSNMIRPTKFDKVVKREICQITSKGTRVYTPQDIEPSTPNSNYLLSVIEK
CPSGSNISHYGVCFLDTTIGDFYLGQFEDDRCNSRLLTLLAHYPPVHVVYERGNLSQKTL
QIFNNNLAACIKESLLRESQFWSSSTTLKNLHEGDYFKKSDSEFQWPTGLQSYLNKSDSL
GLTPAEDKELAVHALGGCIYLLKEYLLEQQLLAQGRFKTYIPPDFSNKTFEASKFANNMV
LDAITINNLRIFGEGSLIKTLDRCCTAFGKRLLREWICRPSCRKDVIIERQEAIQELMNH
SEAVQTTRSILAGLPDLERLLSKIHAQGNPAKQNNHPDGRAIMFEGQTYSKKRITDFITT
LNGFEDVLKIIALFEDFCSTLISKCCKVEPDGEFPSLRESLDYFKTAFDHEEAKKVGCIV
PKKGVDSEYDSVLMELEEIKKDSEQYLEKQKKHFGVKITFHGSDKKRYQIEIPDSQTKKV
GAGFELQSQRKGYKRYYTAESKELLSRQINAEEHRDKVLKDLNRRIFAQFSEKYDMWSMA
VYKLSVLDVLISLTEYAFSGDMCIPEINDGTNEKIFIDIRDGRHPCIISDTFIPNDTLLA
TENFASFMILTGPNMGGKSTLMRQVALLTIMAQIGSYVPASSCRLTLVDRIFTRLGANDD
ILAGQSTFLVELSETSAILQHATPYSLVLLDELGRGTSTYDGTAIAAAVVNALTKLNCRT
LFSTHYHSLVEDYKNNKKITLAHMACMVENEEQDKVSQETVTFLYKLSEGACPKSYGFNA
ARLGGVPAVITSRAHEISKKLEQETNRKHFFITLCKANGSTIRDLIAAM
NT seq 3390 nt   +upstreamnt  +downstreamnt
atgtcgaaagtgaatacattatataattattttacatcgcctaaaactcctaaaacacct
aaacaatcaaataataaacagatatccgatgaaaaacctacaacaccgaaaagagcaagg
ggacaattgaacaaagttaaaactccaagtaaagggaaagaaaataagaatcttgaagat
agaaaaagaatatacaaagatgatgaagaagaagaaaaggaagaaagtgaaccaattcaa
acaaaaaagcgaagattaattattcctgatgaagaatctggagaagattctggagatgaa
tttaaacctgacctagatgatgaatcagaagaatcagattcagtatctgaaggagttagt
gaaagtgaaccaccaaccgcaagtgaagaagaaactccagagaaaaaacggaagattgtt
aattcttttgggaaaaaaccacaaaaaggtgcaaagaaaaatttcaaagaagataaaaaa
gaatcaaaagttcaacaacaaaatcaatcccaaggttcaaataatgttatagattcttgg
ccacacttaaagtatgattttcttcaaccaaataaaatacgagatattaataaaaaatca
ccaaatgattcagattatgatcctaaaactctatatgttcctttggattttttgaatcaa
caaactccagctatgagacaatggtgggaattgaaaagtaaacattttgattgtgttctt
ttctttaagctaggaaaattttatgaattatatcatatggatgctgtaataggtgttaat
gaacttcatcttacctacatgagaggagaatttgcacattcgggatttcctgaaattgga
tatggccgtttttcagcgagtctcatagaaagaggatacaaagtggccagagtagaacaa
acagagaatccagatatgatggcacaacgagttagcaatatgattagaccaacaaaattt
gataaagtagttaaaagagaaatatgccaaataacttctaaaggtacaagagtgtacact
ccacaagatatagaaccatctacacccaattctaattatttattatcagtgattgaaaaa
tgcccatctggttctaacatatctcattatggagtttgtttcttagatactacaatagga
gatttttatcttggtcaatttgaagatgatcgatgtaattctagattattaactttactt
gctcattatcctccagttcatgttgtttatgaacgtggtaatttgtctcaaaaaacgtta
caaatttttaacaataatttagcagcatgtattaaagaatcacttttacgcgaatctcaa
ttttggtcatcttcgactacattaaaaaatcttcatgaaggagattattttaaaaaatca
gattccgaatttcaatggcctacaggcttacaatcatatcttaataaaagtgatagttta
ggtttaactcctgctgaagataaagaattagcggtacatgctttaggtggatgtatatat
ttactcaaagaatatctgcttgaacaacaattattggcacaaggacgttttaaaacatat
attcctccagatttttcaaataaaacatttgaagcttctaaatttgcaaataatatggtt
ttagatgctatcacgattaataatttgagaattttcggggaaggttctcttataaaaacg
ctagatcgttgttgtaccgcatttggaaagagattgttgcgagaatggatttgtagacca
tcttgccgaaaagatgttataattgaacgtcaagaagctatacaagaattaatgaatcat
tcagaagcagtacaaactactcgtagtatattagcagggcttcctgatcttgaaagatta
ttgagcaagattcatgctcaaggaaatccagcaaaacaaaataatcatcctgatggcaga
gctattatgtttgaggggcaaacttattcaaagaaaagaattacagattttattaccact
ttgaatggttttgaagatgtcttaaaaataattgctttgtttgaagatttctgtagcacc
ttaataagcaaatgttgtaaagtggaaccagatggtgaatttccttcattaagagaatct
ttagattattttaagactgcattcgaccatgaagaagccaaaaaagtaggttgtattgtt
ccaaagaaaggagttgattctgaatatgattccgttttaatggaacttgaggaaataaag
aaagattcagaacaatatcttgaaaagcaaaaaaaacactttggagtgaaaattacgttt
cacggttcggataaaaagcgttatcagatcgagattccagattctcaaacgaaaaaagtt
ggtgctggatttgaacttcaatcacaaagaaaaggatacaaacgttattacaccgcagag
tcaaaggaacttttaagtcgacaaataaatgccgaagaacatagagataaagtattgaag
gatttaaatagaagaatatttgcacagtttagcgaaaaatatgatatgtggagtatggca
gtttataaattgtctgttttagatgttcttatttctttaacagaatatgctttcagtggt
gatatgtgtataccggaaattaatgatggtacaaatgaaaagatatttattgatattcga
gatggacgacatccatgtattatttcagatacatttataccaaatgacactttattagca
actgaaaattttgcttctttcatgattctcactgggccaaatatgggcggtaaatcaaca
ttgatgcgtcaagttgcccttctcactataatggcacaaattggaagttatgttcctgca
agttcctgtcgtttaacattagtagatcgtattttcacgagattgggagcaaatgacgat
attttggcaggtcaaagtacattcttagtagaattaagcgaaacttctgcaatattacag
catgctacaccatattctctcgtattactcgatgaattaggacgtggtacatcaacatat
gatggcacggcaattgctgctgcagttgtaaatgcacttacaaaattaaattgtcgtact
ttattctcgacgcattatcattctttggtagaagattataaaaataataaaaaaattaca
ttagctcatatggcttgcatggtagaaaatgaggaacaagataaagtatctcaagaaaca
gtaacatttttatacaaactcagcgaaggagcttgtccaaaatcgtatggtttcaacgct
gcccgattaggtggtgttccagctgtaattacaagtagagcacatgagatttcaaagaaa
ctcgaacaagaaacaaatcgaaaacacttctttattactttgtgtaaagcgaatggttca
actataagggatctaattgctgcaatgtga

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