Apis mellifera (honey bee): 412159
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Entry
412159 CDS
T01057
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ame
Apis mellifera (honey bee)
Pathway
ame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
412159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ame03019
]
412159
03041 Spliceosome [BR:
ame03041
]
412159
Messenger RNA biogenesis [BR:
ame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
412159
Spliceosome [BR:
ame03041
]
Complex B
Other components
Prp19-related factors
412159
Complex C
412159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_8
TPR_15
TPR_12
ARM_TT21_C
DHR-2_Lobe_A
TPR_10
PPR
ARM_TT21
4HB_MCP_1
Microp_apicomplexa_6
Motif
Other DBs
NCBI-GeneID:
412159
NCBI-ProteinID:
XP_006559764
BEEBASE:
GB46894
UniProt:
A0A7M7GLF7
LinkDB
All DBs
Position
LG3:4462436..4467595
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AA seq
836 aa
AA seq
DB search
MLERKDPEGNIYVFNEEDLPYEEEILRNPYSVKHWQRYIDHLKSTKSNNLNIVYERALKE
LPGSYKLWYNYLRQRVNQLKGRCITDLLYEDVNNAFERALVFMHKMPRIWMDYCTLMTEQ
CYITRTRQVFDRALRALPITQHHRIWPLYIEFLKKHNVYETAVRVFRRYLKLAPEDTEEY
IEYLRSIGRLDEAAVKLAQIVNQDDFISKHGKSNHQLWNELCDLISKNPSKIKSLNVDAI
IRGGLRRYTDQLGPLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFE
ELSLSKRMEEAAKNPTEDDDIDLELRLARFEHLMERRLLLLNSVLLRQNPHNVQEWHKRV
RLYEGQPHEIINTYTEAVQTVQPQLAVGKLHTLWVEFGKFYEENNQIADARVVFEKATHV
PYTKVDDLASVWCEWAEMEIRHGNYKEALKLMHRATVMPFRKVAYHDETETVQMRLYKSL
KVWSMYADLEESFGTFKTCKAVYDKIIDLKIATPQIIINYGLFLEENKYFEEAFRAYEKG
IALFKWPNVYDIWNTYLTKFLKRYGGTKLERTRDLFEQCLEFCPPKYAKALYLLYAKLEE
EHGLARHAMSVYERATNAVLPEERFEMFNIYIKKAADIYGVPKTRQIYEKAIEVLNEDNT
REMCLRFAEMETKLGEVDRARAIYAHCSQICDPRVASNFWQIWKEFEVRHGNEDTMREML
RIKRSVQAMYNTQVNMMSAQMLNNTSNSLSDVPTDAMRLLDSKTQDNITTYKDSIKFVRG
VTEKDGKPESQVNNPDEIDIDINDVNEGDIEEDIPIEKQTIPSQVFSSLKTTDDDD
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacgcaaagatccagaaggaaatatatacgttttcaatgaagaagatttaccg
tacgaagaagaaattttaagaaatccatattctgtaaaacattggcaacgttatatagat
catttaaaaagtacaaaaagcaataatttaaatattgtatatgaacgagcattaaaagaa
cttcctggaagttataaattatggtataattatcttcgtcaacgtgtcaatcaattgaaa
ggaagatgcataactgatcttctttatgaagatgtaaataatgcatttgaacgtgcttta
gttttcatgcataaaatgcctagaatttggatggattattgtacattaatgacagaacaa
tgttatattacacgtactcgtcaagtttttgatagagcacttagagctcttcctattaca
cagcatcatcgtatatggccattgtatattgaatttttgaaaaaacacaatgtatatgaa
actgcagtcagagtttttagacgatatctaaagttagctccagaagatacagaagaatat
atagaatacttgagatcaattggaaggcttgatgaagcagctgtaaaacttgcacaaatt
gttaatcaagatgattttatatcaaagcatggaaagtctaatcatcaattatggaatgaa
ttgtgtgatttaatatcaaagaatccttctaaaataaaatctcttaatgtggatgctatt
attagaggtggattaagacgttatactgatcaattaggtcctttgtggaattctttagca
gattattatgttcgtagtggtttatttgaaagggcgagagatatttatgaagaagcaata
caaacagtaactactgttagagactttactcaagtatttgatgcctatgcacaatttgaa
gaacttagtcttagtaaacgtatggaagaagctgcaaaaaatcctactgaagatgatgat
attgatttggaattgagattagcacggtttgaacatttaatggaaagacgtttattactt
ttgaattctgtattactcagacaaaatcctcataatgtacaagaatggcataaaagagtt
agactttatgaaggacaaccacatgaaatcattaatacatatacagaagctgtacaaact
gtgcaaccacaattagcagtaggtaaattacatactttatgggttgaatttggtaaattt
tatgaagaaaataatcaaatagcagatgctagagtagtttttgaaaaagcaactcatgtt
ccttatactaaagtagacgatctcgcttctgtatggtgtgaatgggcagaaatggaaatt
aggcatggaaattataaagaagcattaaaacttatgcatcgcgcgacagttatgccattc
cgcaaagtagcttatcatgatgagacagaaacagttcaaatgagattatacaaatcttta
aaagtttggtctatgtatgctgatttagaagaaagttttggaacatttaaaacatgcaaa
gctgtatatgacaaaattatagatctaaaaattgcaacaccacaaatcattattaattat
ggtctctttttggaagaaaataaatattttgaagaagctttcagagcttatgaaaaaggt
attgcactctttaaatggcccaatgtttatgatatatggaatacatatcttacaaaattt
ttaaaacgttatggtggaacgaaattggaacgaacgcgagatttatttgaacaatgttta
gaattttgtccaccaaaatatgctaaagctttatatttactgtatgcaaaattagaagaa
gaacatggtttagctagacatgcaatgtctgtatatgaacgagcaacaaatgctgttctt
cctgaagaaagatttgaaatgttcaatatatatataaaaaaagcagcagacatatacggt
gtaccaaaaacaagacagatatatgaaaaagctattgaagtacttaatgaagataataca
agagaaatgtgtttaagatttgcagaaatggaaacaaaattaggagaagttgatagagct
cgggcaatatatgcccactgcagtcaaatttgtgatccaagagtagcatcaaatttctgg
caaatatggaaagaatttgaagtaagacatggtaatgaagatactatgcgtgaaatgctt
cgaattaaacgtagtgtacaagctatgtacaacactcaagtaaatatgatgtctgcacaa
atgttgaataatacatcgaattcactatcagatgtaccaacagatgcaatgcgtcttttg
gatagtaaaacacaagataatattactacatataaggatagtattaaatttgttcgtggt
gtgacagaaaaagacggtaaaccggaatctcaagtaaataatccggatgaaatagatatt
gatattaatgatgttaatgaaggagatatagaagaagatatacctattgaaaaacaaact
attccgtcacaagtgttcagtagtttaaaaacaactgatgatgatgattaa
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