Apis mellifera (honey bee): 412627
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Entry
412627 CDS
T01057
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ame
Apis mellifera (honey bee)
Pathway
ame03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
412627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ame03021
]
412627
03019 Messenger RNA biogenesis [BR:
ame03019
]
412627
Transcription machinery [BR:
ame03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
412627
Messenger RNA biogenesis [BR:
ame03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
412627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCCH_4
zf-CCHC
Nab2-like_zf-CCCH_
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
412627
NCBI-ProteinID:
XP_026299235
BEEBASE:
GB54279
UniProt:
A0A7M7SQV2
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All DBs
Position
LG10:complement(7744203..7745983)
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AA seq
286 aa
AA seq
DB search
MECLVANVDNMRFDIEIALDEQYGALPLPFTGMDKSTAAVCQFYPRGTCVKGASCPFRHV
RGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPETK
VRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLAGFCPEGPNCKFMHPRFELPAVQDMQPK
EGKKVMITCHFCGEGGHKAIYCNKMPPDVREAQVRQEIEGNSHATHHMNIHNGPPPRGPQ
KPLEEVTCYKCGTKGHYANKCPKGHLAFLSHAGGSGSGTQNQNYRR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtttagtggcaaatgtagataacatgcgatttgatattgaaattgctcttgat
gaacagtatggagcacttcctttaccttttactggaatggacaaatccactgctgcagta
tgtcaattttatccaagaggtacttgtgttaaaggtgcttcttgtccatttagacatgta
agaggagatcgtacaattgtatgtaaacattggttaagaggtctttgtaaaaaaggtgat
cagtgtgaatttttacatgaatatgatatgacaaaaatgccagaatgttatttctattct
agatttaatgcttgtcacaataaagaatgtccattcctacatattgacccagaaactaaa
gtcagagattgtccctggtatgatcgtggattttgtagacatggaccattatgcagacat
cgacatgttcgtcgtgttttatgcatggcatatttagctggattttgtcctgaaggtcca
aattgtaaatttatgcacccaagatttgaattaccagcagtgcaagatatgcaacctaaa
gaaggtaaaaaagtaatgatcacttgtcatttttgtggagaaggtggtcacaaagcaatt
tattgtaataaaatgccacctgatgtacgtgaagctcaagttagacaagagatagaaggt
aattctcatgctacacatcacatgaatatccataatggacctccaccaagaggaccacaa
aagccacttgaagaagtcacttgttataaatgtggaactaaaggtcattatgccaataaa
tgtccaaaaggtcatttagcatttttgagtcatgctgggggtagtggaagtggtactcaa
aatcaaaattatcgtagatga
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