Apis mellifera (honey bee): 412865
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Entry
412865 CDS
T01057
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
ame
Apis mellifera (honey bee)
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ame04147
]
412865
00535 Proteoglycans [BR:
ame00535
]
412865
00536 Glycosaminoglycan binding proteins [BR:
ame00536
]
412865
Exosome [BR:
ame04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
412865
Proteoglycans [BR:
ame00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
412865
Glycosaminoglycan binding proteins [BR:
ame00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
412865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
DUF1554
Motif
Other DBs
NCBI-GeneID:
412865
NCBI-ProteinID:
XP_006564397
BEEBASE:
GB47258
UniProt:
A0A7M7GYZ9
LinkDB
All DBs
Position
LG11:9106725..9434831
Genome browser
AA seq
1177 aa
AA seq
DB search
MRSRLQSLIFALFCVTRVNADFFAEKKEINYDLIEAAVASADTDDTNLYIDDGLDGFPSF
GFRPGSEVKQPYRLYLPEKLPAEFTLVATFKPMSFRTSYLFAVLNPFETVVQLGIRISDG
PGTNQNVSLIYTNSDLHSHSEEVAKFTVPKLSRKWSKIVIRVSTTDVTLYLNCHEMARQR
VTRIPLELVFDTASTLYIAQAGPHIQEKYDGLLQSLKLYPGHPADLVKCTADFNFDQDVD
LGSGEIDNEVIDNGSGFDINLTDIGRDDDEDRSEESNPPPFITPPPPNPDYKGPKGEKGD
KGDKGESVRGPPGPPGPPGQDEGPPGKKGEPGTCTCNATALMASFTMPKMIQGPKGEQGV
PGQEGKQGQMGLTGVAGPPGERGLEGPQGPKGDKGDVGIPGPEGPQGQKGEPGRDGIPGE
KGAQGPPGPPGKGEFSGYDPSWKPRGIYRTEGITMRPGLPGQKGEAGLPGSPGPKGETGI
AGAKGNKGEPGHKGAKGDHGNEGARGIQGSKGEPGAPGAPGLPGAPGENGRPAEKGDKGD
TGPEGKPGPPGAPGPPGLPGLSGPGGVNVGESMLREKGDKGEGGARGYKGDKGTKGEKGD
KGDSGPAGIPGVNGIQGPQGNKGEPGKDGVAGVQGIAGAKGEKGERGPPGATAIASSGDY
ITIKGEKGAEGKRGRRGRPGPPGPVGPPGKPGAMGEIGLPGWVNTMKGRPGTPGLPGPVG
PAGPKGEKGEPGTPSPYGVSVGVKGDKGDDGFPGIPGQPGREGQRGPPGPPGPPGPPSQG
NYIPVPGPPGPPGPPGPPGLSLIGQKGEPGIGRSHIFGERDYYGVRQVQSVKKKHIPYPT
LQGPRTSLDELKALRELKQLKELKEHLGAGTTATRGPLESTTKIVPGAVTFQNTEAMTKM
SAVSPVGTLAYIIDEQALLVRVNNGWQYIALGSLLPITTPAPPTTSPPPVNPPFEASNLI
NQIPVKADGTGWYPRMLRMAALNEPFTGDMHGVRGADYACYRQAKRAGLRGTFRAFLSSR
VQNVDSIVRLGDRDLPIVNIKGDVLFNSWKEMFNGNGAYFSQNPRIYSFNGKNILTDFAW
PEKVAWHGSHKLGDRAMDTYCDAWHSSSSDRYGLGSPLTGGRLLEQVRYSCDNKFALLCI
EVTSETTRRRRNAEIAEDEDEMSENDYKEYLDSLMED
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcggtctagattgcagtcgctgatattcgccttgttctgtgtgacgcgcgtcaacgcg
gactttttcgccgagaagaaagaaataaattatgatttaatcgaggctgccgttgcatct
gccgatacggacgacactaatttgtacatcgacgatggtctcgatggatttccaagtttt
ggcttccgacccggatccgaagttaaacagccctatcgattgtacttgccggaaaaattg
ccagcagagttcacccttgtggcaactttcaaaccgatgtccttcaggaccagttatctc
ttcgcggttttgaaccccttcgagacagtggtgcaattaggaattcgtatatcggatgga
ccaggtaccaatcaaaatgtctcattgatctataccaattccgacttgcattcgcattca
gaagaagtggcgaaattcacggtgccaaagttgtcgagaaaatggtctaaaatcgttatc
agagtatcaacgacggatgtcactttgtacctgaattgtcacgagatggccaggcaacga
gtgacaagaattcctctggaattggtattcgacacggccagcacgttgtacatcgctcaa
gctggacctcatatccaagaaaagtacgacggtctactgcaatccttgaagctctatccc
ggacatccagcggatttggtaaaatgcacggccgactttaacttcgaccaagatgtggat
ctcggctcaggtgaaatcgataacgaggtgatcgataatggttcaggatttgatattaat
ttgacagacatcggacgagacgatgacgaagacagaagcgaggaaagcaatccaccgcca
ttcatcacaccccctcctcccaacccggactacaagggaccgaaaggtgagaaaggtgat
aaaggcgacaagggtgagagcgttaggggacccccaggtcctcctggtccacctggtcaa
gatgagggtccgccagggaagaaaggagaacccggcacgtgcacctgcaatgcaacagcc
ctgatggcatcctttacgatgccaaagatgatccagggaccgaaaggagaacaaggggtg
ccggggcaagaaggaaaacaaggccaaatggggttgacgggtgttgctgggccaccagga
gagagaggactagaaggaccacaggggcccaagggagataaaggtgacgtgggaataccg
ggaccggaaggtcctcaagggcaaaaaggagaacctggccgcgatggaataccaggggaa
aagggcgctcaaggaccaccaggccccccaggaaaaggagaattctccggatacgatccc
agttggaaacctcggggcatttataggacggaaggcatcacgatgagaccaggactacca
gggcagaaaggcgaggcaggccttccaggaagtccaggaccaaaaggagagacgggaatc
gctggtgccaaaggtaacaaaggcgagccaggtcacaaaggcgcgaaaggagatcacggg
aatgagggtgctcgaggaattcaaggatcgaagggtgaacctggtgcaccgggagcgccg
ggtctccctggtgcgccaggtgagaatggaaggccagccgaaaagggcgataaaggagac
acaggaccagaagggaagccaggccccccgggagcgcctggaccgccaggattgcctgga
ttaagcggtcctggaggggtaaacgttggagaatcgatgttaagggaaaaaggcgacaaa
ggagagggtggtgcgcgtggttacaaaggggacaagggcaccaaaggcgagaagggagat
aaaggtgattctggaccagccggaattcccggtgtaaatggtattcaaggaccgcaaggg
aacaaaggcgagccaggcaaggatggagttgccggtgttcagggaatcgcgggtgcaaaa
ggtgaaaaaggtgagagaggtccgccaggagccaccgctatagcgagttccggagactac
atcacgatcaagggtgagaagggcgcggaggggaagagggggagaagaggacgccctgga
ccaccgggacccgtcggcccacctggaaagccgggagcgatgggagaaattgggttgcct
ggatgggtgaacaccatgaaaggtcgtcctggaactcccggacttcctggacctgttgga
ccagcggggcccaagggagaaaaaggagaaccgggcacaccgagcccttatggagtctct
gtcggcgtaaagggtgataaaggagacgatggtttccctggaattccaggacaacctggg
agggaaggtcaaagagggccaccaggacctccaggaccacctggaccaccatctcaagga
aattatattccagtcccgggacctccaggacctcctgggccaccaggtccgcctggatta
tctttaatcggacagaaaggagagccaggaatcggaagaagtcacatctttggtgaaaga
gattattatggagttagacaagttcaaagtgttaaaaaaaaacacattccatatcctacg
ctgcaaggaccaagaactagtctagatgaactgaaagcactgcgggaattaaaacaattg
aaggaactaaaagaacatttaggtgctggaacaactgcaaccagaggtcctctcgaaagc
acaacgaagattgtaccaggagcagtaacttttcaaaataccgaagctatgacaaaaatg
tctgccgtgagcccagttggaacattagcttatattatagatgaacaagcgctacttgtt
agagtgaacaatggctggcaatacattgcattgggctcacttttaccaataactacacca
gcaccaccgactacatcaccacccccggtgaatccaccttttgaggcttctaatctgatc
aatcaaatacccgtaaaagcagatggaacagggtggtatccacgaatgttacgaatggct
gctttgaacgaaccctttaccggggacatgcacggtgtacgaggagctgactacgcttgt
tatcgacaagcgaagcgagctggtttgaggggtacattccgcgcattcctcagctctaga
gttcaaaatgttgacagcatcgtgaggctcggagatcgagatttgcctatcgttaacata
aaaggggacgttctcttcaactcgtggaaggaaatgttcaacggaaacggggcctatttc
tcacaaaacccaagaatctacagtttcaatgggaaaaatatcctcactgattttgcatgg
ccagaaaaagtggcatggcacggatcacataaattaggagaccgagcgatggacacgtat
tgcgacgcttggcattcaagtagttcagatcgttacggattaggatcaccgttaacagga
ggacgcctcttggaacaagttcgttattcctgcgacaacaagttcgcgctactctgtata
gaagtaaccagcgagaccacaaggaggaggagaaacgccgaaattgcggaggacgaggac
gagatgtcggaaaacgattacaaggaatacttggattctctgatggaagactaa
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