KEGG   Apis mellifera (honey bee): 413173
Entry
413173            CDS       T01057                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
ame  Apis mellifera (honey bee)
Pathway
ame03013  Nucleocytoplasmic transport
ame03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ame00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    413173
  09122 Translation
   03013 Nucleocytoplasmic transport
    413173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ame03019]
    413173
   03041 Spliceosome [BR:ame03041]
    413173
Messenger RNA biogenesis [BR:ame03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     413173
Spliceosome [BR:ame03041]
 Complex C
  Other components
   EJC/TREX
    413173
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    413173
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_HPS5 eIF2A Beta-prop_EML Tricorn_2nd RMC1_N Beta-prop_NOL10_N WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N NBCH_WD40 PAC11 DSE1_N WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_ELP1_1st B-prop_COPA_B_2nd TRM82_WD Beta-prop_WDR75_1st PD40 Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_DCAF12 PROPPIN Beta-prop_NUP159_NUP214 vWF_A DPPIV_N
Other DBs
NCBI-GeneID: 413173
NCBI-ProteinID: XP_396624
BEEBASE: GB46059
UniProt: A0A7M7R903
LinkDB
Position
LG6:13195496..13197036
AA seq 320 aa
MSTSRVDELINYFKSHNKIREQQSHSAKVHSVGWSCDGKLLASGSFDKSVCIFSLCPDRL
KQETTFRGHGGSVDQLCWHAFYPELLSTASGDKTVRIWDTRTQKCTANISTRGENINISW
SPDGNTIAVGNKEDLVTFIDARVMKIRAEEQFNFEVNEISWNKDSDTFYLTNGQGCVHIL
SYPDLELLHVIKAHPGTCICIEFDPTGRYFATGSADALVSLWDADELCCLRTFSRLEWPV
RTISFSYNGQLLAAASEDLVIDIGEVETGEKITDIPVEAATFTVAWHPKQYLLAYACDDK
DTYDRKRDAGSLKVFGFAND
NT seq 963 nt   +upstreamnt  +downstreamnt
atgtctacttctcgtgttgatgaattgataaattattttaaatcacataataaaattaga
gaacaacaaagtcattctgcgaaagtacatagtgtaggatggagttgtgatggaaaactt
ttggcttcaggatcttttgataaatctgtttgcatcttttctctttgtccagatcgttta
aaacaagaaacaactttcagaggacatggtggtagtgtagatcaactatgctggcatgct
ttttatccagagttattgtctactgcaagtggagataaaacagttcgtatatgggataca
agaactcaaaaatgcacagcaaatatcagtacaagaggtgaaaatatcaatatatcgtgg
tcacctgatggtaatacaatagctgtaggaaacaaagaagatttggtgacttttattgat
gcacgagtaatgaaaattcgtgcagaagaacaattcaattttgaagtgaatgaaatttca
tggaataaagattctgatacattttatttaactaatggtcaaggctgtgtacatatttta
agttatccagatttagaattattacatgtaattaaagcacatccaggaacatgtatttgt
atagaatttgatcctactggaagatattttgcaactggttcagcagatgcattagtttct
ttatgggatgcagatgaattgtgttgtttaagaacattttcaagattagaatggccagtg
agaactatatcattttcttataatggacaattattagctgcagcatctgaagatcttgta
atagatataggtgaagttgaaactggagaaaagattacagatataccagtagaagcagca
acttttacagttgcatggcatccaaaacaatatttgttagcatatgcatgtgatgataaa
gatacttatgatcgaaaacgtgatgctggtagtctaaaagtatttggatttgctaatgat
taa

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