Apis mellifera (honey bee): 413484
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Entry
413484 CDS
T01057
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC413484
KO
K03679
exosome complex component RRP4
Organism
ame
Apis mellifera (honey bee)
Pathway
ame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
413484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ame03019
]
413484
Messenger RNA biogenesis [BR:
ame03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
413484
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
413484
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
Isochorismatase
KH_6
EF-hand_1
ECR1_N
EF-hand_5
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_FSTL1
EH
ECR1_N_2
RRP40_S1
EF_SSP120
Motif
Other DBs
NCBI-GeneID:
413484
NCBI-ProteinID:
XP_006568548
BEEBASE:
GB46542
UniProt:
A0A7M7GWF8
LinkDB
All DBs
AA seq
584 aa
AA seq
DB search
MEEYPPINIRLAVNRADLNLLKNKDIQPRIYTPGEEISSQSDFLRGHGTYVDDENTLRAS
VAGILEKVNKLISIKPLKARYQGEIGDVVVGRITEVQQKRWKVDTNSKLDSVLLLSSVNL
PGGELRRRSAEDEQTMRRYLQEGDLICAEVQSTFVDGSLSLHTRVLKYGKLSQGIMLKVS
PALIKRKKTHFHTLENGASLILGNNGYIWIGASRQDTDRSEGGFTQDLSRIPQVNREXLG
NDKVTYQRNMDACFTAFDKDGDGYLSITEFEFICRALFRNDRGKVYNVEENQLKEIYSVF
DLNGDGKIDREEFEICWNRWIKICTRPKSAFLIVDVQNDFITGSLNIKQCAAQHDGSEVI
EPINRLLETVQFDAVFYSLDWHPIDHVSFIDNLHLREIDPSSGISKETVQVYDTITFRGP
PLLKQRLWPRHCIQDSWGAELHKDLKIIDNAIKIYKGTNSEVDSYSVFWDNKKMMETSLS
SQLQEKGATDIYICGLAYDVCVGATAVDALTSGYRTILIDDCSRGVDLVDIEKTKATVIA
NNGVIVNSSQVKAMVEGKDRRPELGYKLAIEIKQKLTFVDDDNQ
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatatccacctattaatattcgtttagcagtaaacagagctgatttaaattta
ttaaaaaataaagatatacaacctcgaatatatactcccggagaagaaatttctagtcaa
tctgatttcttaagaggacatggaacatatgtagatgacgaaaatacattacgtgcatct
gtagctggtattttagaaaaagtaaataagcttatttcgataaaacctttaaaagcacgt
tatcaaggtgaaataggagatgtagttgttggacgtataactgaagtacaacaaaaacga
tggaaagttgatacaaattccaaacttgactctgtattattactttccagtgttaattta
ccaggtggagaattgagaagaagatcagctgaagatgaacaaactatgagacgttatctt
caagaaggagatttaatttgtgcagaagtacaaagtacttttgtagatggttctctttca
ttacatactagagttttaaaatatggtaaattatctcaaggtataatgttgaaagtttca
ccagctcttataaaacggaaaaagacacattttcatactttagaaaatggtgcaagttta
atattagggaataatggttatatatggattggagctagtagacaagatactgatagatca
gaaggtggtttcacacaggacttgtcaagaattcctcaagtaaaccgtgaataacttgga
aacgacaaagttacataccaaagaaacatggatgcatgttttactgcatttgataaagat
ggagatggatatttatctattacagaatttgaatttatttgtcgtgcattatttcgcaat
gatcgtggaaaagtatacaatgttgaagaaaatcaattaaaagaaatatattcagtattt
gacttgaatggagatggaaaaattgatagagaagaatttgaaatatgttggaatcgttgg
attaaaatatgcacccgtccaaaaagtgcatttttaattgtggatgttcaaaacgacttt
ataacaggttccttaaatattaaacaatgtgctgcacaacatgatggttcagaagtaatt
gaaccaattaatcgtttattggaaactgtacaatttgatgcagtattttattctcttgat
tggcatcctatagatcatgtatcttttattgataatttacatctaagagaaattgatccc
agtagtggaatctcaaaagaaacagtacaagtttatgataccataacatttagaggtcca
ccattattaaaacaacgtctatggcctcgtcattgtattcaagattcttggggtgctgaa
cttcataaagatctaaaaattatagataatgcaattaaaatatataaaggaactaattca
gaagtagattcatattcagttttttgggataataaaaagatgatggaaacaagtttatct
tcgcaattacaagaaaagggagcaactgatatatacatatgcggattagcctatgatgtt
tgtgttggagcaacagctgtagatgcacttacaagcggttatcgaactattcttattgat
gattgtagtcgaggagtagatcttgttgatattgaaaaaactaaagctactgttatagct
aataatggagtaattgtaaattcaagtcaagtaaaagcaatggttgaaggaaaagatcgc
cgaccagaacttggatataagttagctatagaaattaaacaaaaattaacttttgtagat
gacgataatcaataa
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