Apis mellifera (honey bee): 413944
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Entry
413944 CDS
T01057
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
ame
Apis mellifera (honey bee)
Pathway
ame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
413944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ame03019
]
413944
Messenger RNA biogenesis [BR:
ame03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
413944
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
CSD2
Rrp44_S1
OB_RNB
OB_HELZ2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
413944
NCBI-ProteinID:
XP_397381
BEEBASE:
GB44940
UniProt:
A0A7M7TFJ3
LinkDB
All DBs
Position
LG11:complement(14343352..14347730)
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AA seq
978 aa
AA seq
DB search
MLTTKIFFRKTKGGNVFKTIREHYLRNDIHCGSKVCEKCIFRIQNVILDNEDSKIKNFKI
MEPHYLLIDTNIILDQIDILEEDILCNIIIVQTVLEEVKHKSSLVYKRLKNLINNVHRKF
YVFINEHHKETYIERNPGESINDRNDRAIRTAAKWYNAHLNLDPVKIKTILLTDDAKNRQ
LAENEGIPTISMEDYILSLENSGFLSDKLCKKSYGMVSKGREFFPCHLTPSEIHDGIKHG
KLLQGTFIASKENFLEGFVNVDGFEKTVFIQGRNNLNRAVDGDIIALEILPENQWSSPSD
IILQDEEETDDDVLETKKILDKFISSNKMEKSPTGKIVGIIRRNWRQYCGILQSNNIEGN
VRHVFIPAERKIPKIRIETRQYGILSKQRIIVAIDSWPRNSRYPLGHFVRALGEIGDKTT
ENEVILLEHDIPHSRFSDAVLSSLPKMPWCITDSDLAQREDFRHLDVCSVDPPGCTDIDD
ALHCRYLSNGNLEVGVHIADVTHFMRPGTPLDKEAALRSTTVYLVDTRIHMLPDLLSSNL
CSLREKEERLTFSCIWEMDEDANIINTRYCKSIIYSRAAMTYDEAQLKIDDAFQQDSLSK
SLRNLNSLAKKLRKRRLENGALVLASPEIRFQVDCETHDPIDIEAKKLRETNSMVEEFML
LANISVAKKILEEFPECAILRRHPEPPPSNFEPLIKAAKNQGFIINVNSGKKLAESLDNC
HKESNPYFNTMLRILATRCMMQAIYFISGMHQQSEYYHYGLASPIYTHFTSPIRRYADVM
VHRLLAVCIGADATYPDLLDKKKNQTLCHNLNYRNRMAQYASRASIALNTHLFFREKIQD
EEGYILFVRKNALQVLIPKFGLEGTLYLNKNKESNVVFIYNGEDHSQTCGNITFHTFDPV
IVQISLNRENVQHEKLIFKLVKPFISGFSVPAATSECSNIILEESTTETVKRKIETEKGS
DINTKTKGSKKKLKKRKH
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaacaaaaatattttttagaaaaactaaaggaggaaatgtatttaagacaatt
agagaacattatctcagaaatgatattcattgtggttctaaagtatgtgagaaatgtata
tttagaattcaaaatgtaattttagataatgaagattcgaaaataaaaaattttaaaata
atggagcctcattatctattaattgatactaatattattttagatcagattgatatttta
gaagaagatattctttgtaatatcataattgtacaaacagtattagaagaagtgaaacat
aaaagttctcttgtttataaaagattgaaaaatcttattaataatgtacacaggaaattt
tatgtatttattaatgaacatcataaagaaacttatattgaacgtaatccaggtgagagc
ataaatgatagaaatgatagagctattagaacagcagcaaaatggtataatgcacattta
aatttagatcctgttaaaattaaaactatattattaacagatgatgcaaaaaatagacaa
ttagcagaaaatgaaggaatcccaactatttcaatggaagattatattttatcattagaa
aattcaggttttttaagtgataaattatgtaaaaagagttatggtatggtatctaaaggt
cgagaatttttcccatgtcatcttacaccatcagaaatacatgatggtataaaacatgga
aaacttttgcagggaacatttatagcttcaaaagaaaattttcttgaaggatttgtgaat
gtagatggatttgaaaagactgtttttatccaaggtcgtaataaccttaatagagctgtt
gatggtgacataattgcattagaaattttaccagaaaatcagtggtcatctcctagtgat
attattctacaagatgaagaagagacagatgatgatgttttagaaacaaaaaaaatatta
gataaatttatatcatcaaacaaaatggaaaaatcacctactggcaagattgttggtatt
attagaagaaattggagacaatattgtggaatattacaatctaataatatagaaggaaat
gtacgacatgtatttatcccagctgaacgaaaaatacctaaaataagaatcgaaactagg
caatatggaatattaagtaaacaaagaatcattgtagctatagattcatggccacgtaat
tctcgatatcctcttggtcattttgtacgtgcgttaggtgaaataggagataaaactact
gaaaatgaagtaatattgttagagcacgatattccccatagtcgattttctgatgctgtt
cttagttcattgccaaaaatgccatggtgtattacagattctgatttagcacaaagagaa
gattttagacatttagatgtatgttcagttgatccaccaggatgtacagatattgatgat
gctcttcattgtagatatttatcaaatggtaatttggaagtaggtgtacatattgcagat
gtaacacattttatgagaccaggaacacctttggataaagaagcagcactacgaagtacg
actgtatatttggttgatacaagaattcatatgctccctgatttacttagttcaaatctt
tgttctttacgtgaaaaagaagaaagattaacattttcttgtatatgggaaatggatgaa
gatgcgaatataattaatactagatattgcaaatccataatttattcacgagcagcgatg
acttatgatgaagctcaattaaaaattgatgatgcttttcagcaagattcactttcaaaa
tcactaagaaatcttaatagcttagctaaaaaattaagaaaaagacgtttggaaaatgga
gcactagtgttagcatctccagaaattcgttttcaagtagattgtgaaactcatgatcct
attgatatagaagcaaaaaaattacgagaaactaactctatggtagaagaatttatgtta
cttgcaaatatttcagttgctaaaaaaattttagaagaatttccagagtgtgctatatta
agaagacatcctgaacctccaccttctaattttgaacctcttataaaagctgcaaaaaat
cagggctttattataaacgttaatagtggtaaaaaattagcagaatcattagataactgt
cataaggaaagcaatccatattttaatactatgttaagaatacttgctacacgttgtatg
atgcaagctatatattttattagtggaatgcatcaacaaagtgaatattatcattatggt
ttggcatctcctatttatactcattttacatcgcctattcgacgatatgcagatgtaatg
gttcatcgtttattagcagtttgcattggggctgatgcaacatatcctgatttattagat
aagaaaaaaaatcaaacactttgtcataatctgaattatcgtaatagaatggctcaatat
gctagtcgagcatctatagcattaaatactcatttattctttagagagaaaattcaagat
gaagaaggatatatactctttgtgcgaaaaaatgcgttacaagtattgatcccaaaattt
ggtttggagggtactttatatttaaataaaaacaaagaatctaatgttgtatttatatat
aatggtgaagatcattcacaaacttgtggaaatattacatttcatacttttgatccagtc
atagtacaaataagtttaaatagagagaatgtacaacatgaaaaattgatatttaaactg
gttaaaccatttatttcaggatttagtgtacctgcagcaacttcagaatgcagcaatatc
atattagaagaaagtacgacagaaactgtaaaacgaaagatagaaacagaaaaaggatca
gatattaatactaaaactaaaggaagtaaaaagaaactgaaaaagaggaaacattag
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