Apis mellifera (honey bee): 551033
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Entry
551033 CDS
T01057
Name
(RefSeq) pre-piRNA 3'-exonuclease trimmer
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
ame
Apis mellifera (honey bee)
Pathway
ame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
551033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ame03019
]
551033
Enzymes [BR:
ame01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
551033
Messenger RNA biogenesis [BR:
ame03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
551033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
DNA_pol_A_exo1
RNA_bind
DUF1866
Motif
Other DBs
NCBI-GeneID:
551033
NCBI-ProteinID:
XP_016770929
BEEBASE:
GB49318
UniProt:
A0A7M7IKY7
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Position
LG12:complement(8275813..8367051)
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AA seq
535 aa
AA seq
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MNEVLKTNFKTLYPKLEIAVNNATFIAIDAEFTGLYSEEKLKHSFFDSFNDRYKLLKKNI
QQFMIIQFGIATFRHVPYENTYKVDCFNFYLFPKSIPLKNRHLIWQVAALEFLCKHNFEF
NKFLKEGISFLDETDEKLLKNYIKEDSLAYNLNHLTYEEENEFINYKTKISEWIANKSGE
TLKVETSNPILQYLIHKDIRHNYKNVWSISDDKSVNIIEISPNMHEFIRENDKETLEKEL
LDYYIGFSIVFKLLASSKKIIVGHNILLDLMFMHQQFYKPLPNSYNEFKKNIHELFPQIY
DTKFLSYEVRKLFSKEEVSWKISSLSTLYEYFTTKGKLLTLNSPKIAMNNEESSNSDIIL
DEKKYHTAGWDAYFAGYIYIKMAHIFCVNKFGIGLEERIATHAELISSIKNFVNCINITR
GNEMYMKFDGPDPMLSRPEWLHVKLKSPSVDIKQLMEKFSSFGQVDVMPFAQRRVLVAVA
NHKSALHILRHFNTSEEFQVARYSRIRHATPISICLWSGVILSGSLFAWMLKKCF
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagttttaaaaacgaattttaaaactttgtatccaaagttggaaatcgctgta
aacaatgcaacttttattgccatcgatgctgaatttactggtttatattcagaagagaaa
ttgaaacatagctttttcgattcgttcaatgatcgttataaattattaaagaaaaatatt
cagcaatttatgataatacaatttggcattgcaactttccgtcatgttccttatgaaaat
acctataaagtagattgttttaatttttatttgtttccaaaatctataccattaaaaaat
agacacttaatatggcaagtggcagcattagagttcctttgtaaacataattttgaattt
aataaatttttaaaggaaggtatttcattcttggatgagacagatgaaaagttattaaag
aattatataaaagaagatagtttagcgtataatttaaatcatttaacatatgaagaagaa
aatgagttcataaattataaaactaaaatttctgaatggattgctaacaagagtggagaa
acattaaaggtggaaacttctaatcctatattacaatatttgatacataaagatataaga
cacaattataaaaatgtatggagtatatcggatgataaatcagtaaatattattgaaata
tcacctaacatgcatgaattcataagggaaaatgataaagaaactttggagaaagaatta
ttagattattacataggattttctatagtatttaaactcttggcctcttctaaaaaaata
atagtaggacataatatacttttagatttaatgtttatgcatcaacaattttataaacca
ctgccaaattcatataatgaattcaaaaaaaatatacatgaattatttccacaaatatat
gacacaaaatttttaagttacgaagtacgaaaattatttagcaaggaagaagtgagttgg
aaaataagttcattgagtactttatacgaatattttacaactaaaggaaaattattaacc
ttgaattcaccaaagattgcaatgaataatgaagaatcttcaaactcagatattatccta
gatgaaaaaaagtatcacactgctggatgggatgcttactttgctggatatatatatata
aaaatggcacatatattttgtgtaaataaatttggaataggtttggaagaaaggatagca
acgcatgctgaactaataagcagcataaaaaactttgtaaattgtataaatataacaaga
ggcaatgaaatgtatatgaaatttgatggtccagatccaatgttatcaagaccggaatgg
cttcatgtgaagttaaaatcaccatctgtagatatcaaacagttgatggagaagttttca
tctttcggccaagtggatgtgatgccttttgctcaaagacgtgttttggtagctgtagca
aaccataaaagcgcgttacacatattgcggcatttcaataccagcgaggaatttcaggtg
gcacggtatagtcgcataaggcacgcgacacccatcagcatctgtttgtggagcggagtc
atcttgtccggaagtttatttgcctggatgttgaaaaaatgtttttaa
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