Aeromonas media: B224_0390
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Entry
B224_0390 CDS
T03075
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
amed
Aeromonas media
Pathway
amed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B224_0390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amed03400
]
B224_0390
DNA repair and recombination proteins [BR:
amed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B224_0390
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B224_0390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AHX59554
LinkDB
All DBs
Position
291649..292359
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AA seq
236 aa
AA seq
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MLNPAFVIHSRPYRETSQLVEVFTQDSGRFTLVARGSRGPRSPLKGLLQPFTLLTMSWRG
KGDLKNLAQVECPDHSLRLGGDRLFYGLYLNELVYYLLEAHTPFPEVFDAYARALMALAD
GETPELPLRRFEFLLLQALGYAVDFEYAADDDTPIQPDLLYGFERELGFVACERAPDPRT
LFLGAHLLAFAEGRFDTPPLLQAAKRFSRLALQPYLGKRQLKSRELFLKRKASMQG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaacccggctttcgtcatccacagtcggccctatcgggagaccagccagctggtc
gaggtcttcacccaggatagcggccgatttaccctggtggctcgcggttcccgcgggcca
cgctcccctctgaaggggctcctgcaacccttcaccctgctcaccatgagctggcgtggc
aagggagatctcaagaacctcgcccaggtcgaatgcccggatcactccctgcgactcggt
ggcgatcgcctgttctacggtctctatctcaacgagctggtctactacctgctcgaagcc
catacccccttccccgaggtcttcgatgcctatgcccgtgccctgatggcgctggcggac
ggcgagacgccggagctgccactgcgccgcttcgagttcctgctgctgcaggccttgggt
tatgcggtggatttcgaatatgctgccgacgacgataccccgatccagcccgatctgctc
tacggtttcgaacgggagctcggctttgtcgcttgcgagcgggcgccggatccccgtacc
ctgttcctcggcgcccacctgctggccttcgccgaggggcgattcgatacccctcccttg
ctgcaggcggccaagcgtttcagccggctggcgctgcagccctatcttggcaaacgccag
ctcaagagccgggagctgtttttaaagcgtaaagccagcatgcaaggctga
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