Aeromonas media: B224_0411
Help
Entry
B224_0411 CDS
T03075
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
amed
Aeromonas media
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amed03016
]
B224_0411
Enzymes [BR:
amed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
B224_0411
Transfer RNA biogenesis [BR:
amed03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B224_0411
Prokaryotic type
B224_0411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
RTC4
Motif
Other DBs
NCBI-ProteinID:
AHX59568
LinkDB
All DBs
Position
307445..308506
Genome browser
AA seq
353 aa
AA seq
DB search
MMLEQLSYLHGEPVARGILKAEAADFVVNEDLGFEPCGEGEHIFVRVRKTGENTAWVAGL
LADAAGVNRNAVTWAGLKDRHAVTEQWFGIHLPGKGEPDLSVIQSDSIQILQAKRHNKKL
RVGYLKGNHFTLRLTGLEQAGDLEARLQAIATQGVPNYYGEQRFGRDGNNLDAAKAMFAG
KRIKDRNKRSLYLSAARSMLFNAIVSARIEQGLAHQLLAGDCVMLRGSHSIFSEEVLTPE
LEARLASGDVQLTAPQWGRGRLASQGAAAEFEQAVLAPYAEWCDGLEKAGLDQDRRPLLL
KPEQMSWQQDGEVLTLSFFLPAGAFATSVVRELMQAEEADHGFRNPTDANSGQ
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgatgctggaacagctgagctatctgcacggggagcctgtcgcccgcggcatcctcaag
gccgaggccgccgacttcgtggtgaatgaagatctcggcttcgaaccctgcggggagggg
gagcacatcttcgtgcgggtgcgcaaaaccggcgagaacaccgcctgggtcgcgggcctg
ctggccgatgcggccggcgtcaaccgcaatgcggtgacctgggcgggtctcaaggatcgc
cacgcggtgaccgagcagtggttcggcattcatctgccgggcaagggcgaaccggatctc
tctgtcatccagagcgacagcatccagatcctgcaggccaagcgccacaacaagaagctg
cgggttggctacctcaagggcaaccacttcaccctgcgcctcaccggtctggaacaggca
ggcgatctggaagcccggctgcaggccatcgccactcagggcgtgcccaattactacggc
gagcaacgctttggccgggatggcaacaacctggacgcggccaaggcgatgtttgccggc
aagcggatcaaggatcgcaacaagcgctccctctatctctccgccgcccgcagcatgctg
ttcaacgccatcgtcagcgcccgcatcgaacaggggctggcacaccagctgctggccggt
gactgtgtgatgctgaggggcagccactccatcttcagtgaagaggtgctgactcccgag
ctggaggcgcgcctcgcctccggcgacgtgcagctcaccgccccccagtggggtcgtggc
cggctggcgagccagggtgccgccgccgagtttgaacaggcagtgctggccccttacgcc
gaatggtgtgacgggctggagaaggccggactggatcaggacaggcgtccactgctgctc
aagccggagcagatgagctggcagcaggatggcgaggtgctgaccctctccttcttcctg
ccggccggagcctttgccaccagcgtggtgcgcgagttaatgcaggccgaagaggccgat
cacggtttcaggaacccaaccgatgcgaattctggtcagtaa
DBGET
integrated database retrieval system
