Aeromonas media: B224_0418
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Entry
B224_0418 CDS
T03075
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
amed
Aeromonas media
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amed03021
]
B224_0418
Transcription machinery [BR:
amed03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B224_0418
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AHX59575
LinkDB
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Position
313799..314782
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AA seq
327 aa
AA seq
DB search
MSQEQLVMQDAELEFDEELEAQEEEEVQEVAAEAEEIISDELMVPELNKVMDATQLYLGE
IGFSPLLTAEEEVYYARRALRGDKAARKRMIESNLRLVVKIARRYNNRGLVLLDLIEEGN
LGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRTARE
LSHRLDHEPTAEDIAFALDRSVDDVNRMLKLNEKITSVDTPIGGDRDKALLDVLSDERGM
GPELESQEDDMRSSIVHWLEELNPKQREVLARRFGLLGYEPATLEDVGAEIGLTRERVRQ
IQVEGLRRLREILLGQGLSIEALFRTN
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagaacaactggtaatgcaggatgcagagttagagttcgacgaagagctggag
gcccaggaggaagaagaggttcaggaggttgccgccgaggctgaggagatcatctccgat
gagctcatggtgccggaactgaacaaggtgatggacgccacccagctctatctgggggag
atcggcttctcccccctgctcaccgctgaagaggaagtctactacgcccgtcgtgccctg
cgcggtgacaaagccgcgcgcaagcgcatgatcgaatccaacctgcgcctggtggtcaag
attgcccggcgctacaacaaccgcggcctggtgctgctggatctcatcgaagagggcaac
ctcggtctcatccgcgcggtcgagaagttcgacccggagcgcggcttccgtttctccacc
tatgccacctggtggatccgccagaccatagagcgggccatcatgaaccagacccgcacc
atccggctgccgatccatgtggtgaaggagctgaacgtctacctgcgcaccgcgcgcgaa
ctctcccaccgcctagaccatgaacccaccgccgaagacatcgccttcgcgctggatcgc
tcggtcgacgatgtgaaccgcatgctcaagctcaacgaaaagatcacctcggtggatact
cccatcggcggcgatcgcgacaaggccctgctcgatgtcctgtccgatgagcgaggcatg
gggccagagctggagtcccaggaagatgacatgcgcagcagcatagtccactggctggaa
gagctgaatcccaagcagcgtgaggtactggctcgccgcttcggcctgctcggttatgag
ccagcgacgctcgaagacgtgggggccgagattggcctgacccgggagcgggtgcgccag
atccaggtcgaggggttgcgccgcctgcgggagatcctgctgggacaggggctctccatc
gaggccctgtttagaaccaattga
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