Aeromonas media: B224_0585
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Entry
B224_0585 CDS
T03075
Name
(GenBank) RTX protein
KO
K20276
large repetitive protein
Organism
amed
Aeromonas media
Pathway
amed02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B224_0585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
HemolysinCabind
Big_9
Cadherin_3
VWA
VWA_2
DUF5925
Calx-beta
Motif
Other DBs
NCBI-ProteinID:
AHX59694
LinkDB
All DBs
Position
complement(437973..444353)
Genome browser
AA seq
2126 aa
AA seq
DB search
MNGYNDAAIIAGSDTGGVTEDESTPLLTETGTLSVTDVDGADEAKFLAGNGTPSAGALGS
LTITEGGAWTYNVDNSKVQYLGEGETKVETFTVQSVDGTEHTVTITITGVNDAAVITGSD
SGAVTEDESTPTLTETGTLSVTDVDGADEAKFLAGNGTPSAGALGSLTITEGGAWTYNVD
NSKVQYLGEGETKVETFTVQSVDGTEHTVTITITGVNDAAVITGSDSGAVTEDESTPTLT
ETGTLSVTDVDGADEAKFLAGNGTPSAGALGSLTITEGGAWTYNVDNSKVQYLGEGETKV
ETFVVTSVDGTEHTVTITITGVNDAAVVSSANVTLTETDAPLVTGGTLTATDVDNPDNTF
TPITVVGQYGEFTLAKDGQWTFTANSAFNALNVGDKVSETFGVTSVDGTKSSVTVTITGS
NDAAVVSSANVTLTETDAPLVTGGTLTATDVDNPDNTFTPITVVGQYGAFTLAANGVWSF
TANSAFNALNVGDQLSESFAVTSVDGTKSSVTVTITGSNDAPTLSIDSGAVVSEEGLTGG
ITDTAGSSDNSNSIVANGKITVGDVDSQDTLTISLSGPTGLTSGGAAVQWTWNAATKVLT
GYTGTPGGTDYKTVMDVKLTAPVGGSKGEWSYDVTLKAPVDHQNPDNEDVKDIKISVTVS
DGKTTDTKSLSISVEDDSPVAGDMDAVAVTRTNIPDTLTGLFDLTKYSGNQATLNANGFS
ITAMGFTSATDPTLIAASVNGSSAGLGVASVASPYHNIANEIDFRHFANGKSASEQLIIK
LDAGKVAYGANIKFSQMFGGELESGVVEFYRGGVLIGTQTFSSNAASGDYAGNFQVQQGG
FDTMVIKATNNGNTNTSDNSDLTVKSIEFLGANTVPAIAYGSGTVTPQWGADGKGYMQLL
GSNETGLTTATGKLITTSMESANTLIGKASDDTLVFRLEFTPATGKWEFFQYQSMSKPLG
DGDIDFRIQVTDGDGDVSIGSFATKPLFTPMVQGISVDSVTEGGSLEHTVTLSDATQEAT
QYDFAIRGNGINPASNLDWGTAQFSNGVTYNSTTGKITVPAGVSGFTVTIPTVNDRLVEA
NETLSVTIGGQSGTGTILDNDRAPTAAGGHSAGQEDKPQVLTWAQFGASDDQAASDLSVK
IGTLPLSGKLEYLNAAGQWVTVSSGALISYAEVNAGHLRFVPGLNESSTSASNGGGALIG
NLKGDYASIGYQISDGANLSNSGKLVIDVTAVADKPTVNVTLMGNGMPSYSQSFPSSGIT
TGQFQSGSFDKGDLGITNTLTDSTSSKDTVVGGDGNDYIVSVKGGGDHFVGGNGNDVLVG
GNSVSGDTLDGGVGNDILVAGLGGDTLYGGAGDKDIAVLSGNRADYAITKGSGYSINDRW
FNFSVTEKGVGITKALHDVEYVQFADGVYQINQDTGVLTLVQPVVVDYPLEVSVSLSDRD
GSEVLDSLVLSGMPKGAQLYNGNQLLGAVGDDGKLTFTANSGLWSASALDVKLSGLTLRV
PGSSAGQVDLKVEAIAKEVGTDQTSSATDDDSIRLSYFNATEGEPGDQSRTYGSEHNIVV
GDLDGSVVLPGQNYNLAFMVDTSSSIGGDMATIRNQLIQVFKDLQTSAGKESAGKVNVFL
VDFDTQVNRSVSVDLKDPNSWGLLEDVISQMNGYEGYTNYEDPLKATSNWFNSDMAKNNT
NAKNLAYFITDGEPNSFFYNENTNPVVNTKTGEGLDTFVNVNNYVPGAAFYANIGGAQRV
IVDTNGDVRQWSQNGKKWEYSVIGTLKPQGDGSFEISDAYIYRYTNDTARNNALSVLPLL
EANNVVLAAIGIGSGVSSDILKLFDSDKVVQSNVSAGDLASTILGSTSSNLPGSDRIDGG
AGDDILFGDAVRFTGISGEGYAAIKQYVSGKLGAGSVTDAQVHSYITDHASEFDQSSSND
KADVLIGGDGNDILFGQGGDDFLFGGAGNDILFGGAGNDTLYGESGNDSLYGGSGNDTLF
GGIGDDTLSGGLGNDILVGGLGNDILKGDAGADTFIWLKGDTEAGKVAKDYIVDFSKSEG
DKLDLSDLLDSDGSKSESSLKSLLSVFQDSEGVHLQVKESVTAPVTQEIVLMNHTFDTLT
GGTGTTANQVIDYMLNPNNHMLDIDK
NT seq
6381 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggttacaatgatgctgccatcattgccggcagcgacaccggtggcgtgaccgaa
gatgagagcaccccgctgctgaccgagaccggcaccctgagcgtgaccgacgtggacggc
gccgatgaggccaagttcctggccggcaacggcaccccgagcgcgggtgcgctgggtagc
ctgaccatcaccgagggcggagcctggacctacaacgtcgacaacagcaaggtgcagtac
ctgggcgaaggcgagaccaaggtcgagaccttcaccgtgcagtctgtggatggcaccgag
cacaccgtcaccatcaccatcaccggcgtcaacgatgcggcggtgatcaccggtagcgac
agcggtgcagtcaccgaagatgagagcaccccgaccctgaccgagaccggcaccctgagc
gtgaccgacgtggacggcgccgacgaggccaagttcctggccggcaacggcaccccgagc
gcgggtgcgctgggtagcctgaccatcaccgaaggcggagcctggacctacaacgtcgac
aacagcaaggtgcagtacctgggcgaaggcgagaccaaggtcgagaccttcaccgtgcag
tctgtggatggcaccgagcacaccgtcaccatcaccatcaccggcgtcaacgatgccgcg
gtgatcaccggtagcgacagcggtgcggtcaccgaagatgagagcaccccgaccctgacc
gagaccggcaccctgagcgtgaccgacgtggacggcgccgacgaggccaagttcctggcc
ggcaacggcaccccgagcgcgggtgcgctgggtagcctgaccatcaccgaaggcggagcc
tggacctacaacgtcgacaacagcaaggtgcagtacctgggcgagggcgaaaccaaggtc
gagacctttgtggtcacctccgtggatggcaccgagcacaccgtcaccatcaccatcacc
ggcgtcaacgacgcggcggtggtgagcagcgccaacgtgaccctgaccgagaccgatgcg
ccgctggtgaccggcggcaccctgaccgcgaccgacgtggacaacccggacaacaccttc
accccgatcaccgtggtgggccagtacggcgagttcaccctggcgaaggacggccagtgg
accttcaccgccaacagcgcgttcaacgcgctgaacgtgggtgacaaggtgagcgagacc
ttcggtgtcaccagcgtggacggcaccaagtcgagcgtgaccgtgaccatcaccggcagc
aacgacgcggcggtggtgagcagcgccaacgtgaccctgaccgagaccgatgcgccgctg
gtgaccggcggcaccctgaccgcgaccgacgtggacaacccggacaacaccttcaccccg
atcaccgtggtgggtcagtacggcgcgttcaccctggcggccaacggggtgtggagcttc
accgccaacagcgcgttcaacgcgctgaacgtgggggatcagctgagcgagagcttcgcg
gtgaccagcgtggacggcaccaagtcgagcgtgaccgtgaccatcaccggcagcaacgac
gccccaactttgagtatcgacagtggtgcagtcgtttctgaagaagggcttactggcggc
attaccgataccgcaggcagcagtgataactccaacagcattgttgccaacgggaagatc
acggtcggcgacgtcgatagccaggatacgctcactatcagtctgagtgggccgaccggt
ctgacttccggtggtgcggcagttcagtggacttggaatgctgccaccaaggtgctgacc
gggtataccggcacaccgggtggtaccgactacaagacggtcatggacgtgaagctgacc
gcgccggttggtggcagcaagggtgagtggagctacgacgtgaccctcaaggccccggtt
gaccatcagaatcctgataatgaggatgtaaaagacatcaagattagtgtgacggtatcg
gatggcaagaccaccgataccaagagtctgtccatctcggtcgaggacgactcgccggtg
gcaggcgacatggatgccgtggccgtgaccagaacgaatatccctgacaccctgactggt
ctgttcgatctgaccaaatacagcggcaatcaggccaccctgaatgcgaacggcttcagc
atcacggcgatgggcttcacttcggcaaccgacccgacgctgattgcggcgagcgtcaat
ggctccagcgccgggctgggggttgccagcgtggcatctccctaccacaacattgccaac
gagatcgatttccgccacttcgccaatggtaaatcagcgtccgagcaactgatcatcaag
ctggatgcgggcaaggtggcttatggtgccaacatcaagttcagccagatgttcggtggc
gagctggagagcggtgtggtggagttctatcgcggtggcgtgctgatcggtacccagacc
ttcagctccaacgctgcgagtggcgactatgccggcaacttccaggtgcagcagggtggc
ttcgacaccatggtcatcaaggccaccaacaacggcaacaccaataccagtgacaacagt
gacctgacggtgaagagcatcgagttcctcggtgccaacacggtacccgccattgcctat
ggctcgggtactgtcactccgcagtggggagcagatggcaagggctacatgcagttgctc
ggctccaacgagaccggcctgaccacggccaccggcaagctgatcaccaccagcatggag
tcggccaataccctgatcggcaaggccagcgacgacaccttggtgttccgtctggaattc
accccggccaccggcaagtgggagttcttccagtaccagagcatgtccaagccgctgggg
gatggcgacatcgacttccggatccaggtgacggatggcgatggggatgtgagtatcggg
tcgtttgccaccaagccgctctttacgccgatggtgcaggggatctctgtcgacagcgtg
accgaaggcggtagcctggaacatacggtgaccctgtccgacgcgacccaggaggcgacg
caatatgacttcgccatcaggggcaacggcatcaaccccgcatccaacctggattggggc
acagcccagttcagcaacggggtgacctataacagcaccaccggtaagatcacggtgccg
gccggggtatccggtttcaccgtgaccattccgacggtgaacgatcgtctggtcgaggca
aacgagaccctgtcggtgaccataggtggccagagcggcaccggtaccatccttgacaac
gatcgggcgccgaccgctgcagggggccacagtgccgggcaggaagacaagccccaggtg
ctgacctgggcacagtttggtgccagcgatgatcaggctgcgagcgatctcagcgtgaag
atcggcaccctgcctctcagtggcaagctcgagtatctcaatgccgcgggtcagtgggtg
accgtctcgagcggtgcccttatctcttatgccgaggtgaatgcgggtcatttgcgcttc
gtgcctggtctgaacgagtcgagcaccagcgccagcaatggcggcggtgccttgatcggc
aacctgaagggcgactatgccagcatcggctatcagataagcgacggggccaacctcagc
aacagcggcaagctggtgatcgacgtgactgcggtggccgacaagcccacggtcaacgtc
accctgatggggaatggcatgccgtcttacagccagagcttcccgagctcggggatcacc
acgggccagttccagtccggcagcttcgacaagggggacctcgggatcaccaacactctg
accgatagcacttctagtaaggacaccgtggtgggtggtgatggcaacgactacatcgtc
agcgtgaaggggggcggcgaccacttcgtcggtggcaacggcaatgacgtgctggtcggt
ggcaactcagtgtcgggcgataccctcgacggcggcgttggaaacgacattctggtcgct
gggttgggtggcgatactctctatggcggtgctggtgataaagatatcgctgtactgtcc
ggcaaccgtgccgactacgctatcacgaagggcagcggatactcgatcaatgatcgctgg
ttcaacttctccgtcacggagaagggggtcggcatcaccaaggcgctgcacgacgtggag
tatgtccagttcgccgacggtgtctaccagatcaatcaggatacgggcgtgctgaccctg
gtgcagccggtggtggtcgactacccgctggaggtgagcgtctccctgagcgatcgggat
ggcagcgaagtgctcgacagcctggtattgagcgggatgccgaagggcgcccagctctat
aacggcaaccagttgctgggcgcagtcggggatgatggcaagctcaccttcaccgctaac
agcggtctgtggagtgcgagcgcgctggatgtgaagctgagcgggctgaccctgcgagtc
cccggcagcagtgccggccaggtcgatctcaaggttgaggccatcgccaaggaggtaggg
accgatcagaccagctccgccaccgacgatgacagcatccgcctgagctacttcaacgcc
accgaaggggagccgggggatcagagccggacctatggcagcgaacacaatatcgtggtg
ggggatctggatggtagcgtggtgctgcccggccagaactacaaccttgcctttatggtc
gacacatcgagcagtattggtggcgatatggcgacgattagaaatcagctgattcaggtg
ttcaaagatcttcagacgagcgcgggcaaggagtcggcgggcaaggtcaacgtcttcctg
gtcgattttgatacccaggttaatcgttccgtcagcgtggatctgaaagatcccaattct
tgggggttgttggaggatgttattagccagatgaatggctatgagggatataccaactat
gaggatcccctcaaggcaacctccaactggttcaacagcgacatggccaagaacaacacc
aatgctaagaatctggcctatttcatcaccgatggagaacccaactccttcttctacaac
gaaaataccaatccggtcgtgaacaccaagactggggaagggctggatacttttgtcaac
gtcaacaactacgtaccgggagcggccttctacgccaacatcggcggcgcccagagggtg
attgtcgataccaacggcgatgtcagacagtggtcgcagaatggaaagaaatgggaatat
agcgtcattggaacccttaaaccccagggggacggaagcttcgaaatctcagatgcttac
atttatcggtataccaatgacacagccagaaacaacgcattgagcgtgctgccgctgctg
gaggcaaacaatgtggtgctggccgcaattgggatcggcagcggagtatcgagcgatatt
ctcaagctgtttgatagcgacaaggtggtgcagtccaatgtgtcagccggcgatctggcc
agtaccatactgggttccaccagcagtaacctgccgggcagcgaccggatcgatggcggg
gccggcgacgacatcctgtttggcgacgctgtacgcttcaccggcatcagcggtgaaggc
tacgcagccatcaagcagtatgtgagcggcaagctgggggccgggtcggtgaccgatgcc
caggtgcattcctacatcacggatcacgccagcgagttcgatcagtcctccagtaacgac
aaggctgacgtgctaatcggcggggatggcaacgacatcctgttcggccaggggggcgat
gacttcctgttcggcggggctggcaacgacatcctgttcggtggtgccggcaacgacacc
ctgtacggcgagagcggcaacgattccctgtacggtggtagcggcaacgataccctgttt
ggcggtatcggcgacgataccctgagcggtggtctgggcaatgacatcctggtcggcggg
cttggcaatgacatcctgaagggggatgcgggggccgataccttcatctggctgaagggg
gataccgaagccggcaaggtggccaaggactacatcgtcgacttcagcaagtcggaaggg
gacaagctggatctcagcgatctgctcgacagcgatggcagcaagagcgagagctccctg
aagagcctgctctcggtgttccaggacagcgagggggtgcatctgcaggtcaaggagagc
gttactgcaccggtaactcaggagatagtgctgatgaaccacaccttcgacaccctgacg
gggggcacggggaccacggccaaccaggtgatcgattacatgttaaatccgaacaatcac
atgctggatatcgacaagtaa
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integrated database retrieval system
