Aeromonas media: B224_0662
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Entry
B224_0662 CDS
T03075
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
amed
Aeromonas media
Pathway
amed03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
B224_0662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amed03019
]
B224_0662
03009 Ribosome biogenesis [BR:
amed03009
]
B224_0662
Messenger RNA biogenesis [BR:
amed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B224_0662
Ribosome biogenesis [BR:
amed03009
]
Eukaryotic type
Pre-60S particles
RNases
B224_0662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AHX59747
LinkDB
All DBs
Position
500305..500814
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AA seq
169 aa
AA seq
DB search
MEMTGLDPEQNVVLEIATIITDKDLNVLAQGPVIAIHQSDEELAKMDEWNVNTHTKSGLV
ARVKASEHDEARAVAETLEFIRQWVPERTSPLCGNSIGQDRRFMVKHMGELEAFFHYRNV
DVSTIKELVRRWQPELLEKFTKSGSHQALDDIRESIAELQFYRSHVFKI
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggagatgacggggctggaccccgaacagaacgtggttctggagatcgccaccatcatc
accgacaaggatctgaacgtgctggcacaagggcccgtcatcgccattcaccagagcgat
gaagagctggccaagatggacgagtggaacgtcaacacccacaccaagagcggactggtg
gcccgggtcaaggcgagcgagcacgacgaggcccgcgccgtggccgagaccctcgagttc
atccgccagtgggtgccggagcgcaccagccctctgtgtggtaacagcatcggccaggat
cgccgcttcatggtcaagcacatgggcgagctggaagccttcttccactaccgcaatgtc
gacgtcagcaccatcaaggagctggtgcgccgctggcagccggagctgctggaaaagttc
accaagagcggttcccaccaggcgctggacgacattcgcgagtccatcgccgaactgcag
ttctaccgcagccacgtcttcaaaatctga
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