Aeromonas media: B224_1474
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Entry
B224_1474 CDS
T03075
Name
(GenBank) putative helicase, ATP-dependent
KO
K19789
DNA repair protein RadD
Organism
amed
Aeromonas media
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amed03400
]
B224_1474
DNA repair and recombination proteins [BR:
amed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
B224_1474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
zf-tcix
DUF7577
AAA_22
AAA_16
DZR
SLFN-g3_helicase
Zn_Ribbon_1
AAA
TerL_ATPase
Motif
Other DBs
NCBI-ProteinID:
AHX60335
LinkDB
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Position
complement(1127849..1129675)
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AA seq
608 aa
AA seq
DB search
MWPQDPYNGAILRRTMSKHHPLMFVLRPYQTDAVNAVISHFRKHPDPAVVVLPTGAGKSL
VIAELARKARGRVLVLAHVKELVEQNHAKYEAWGLKADIFAAGLARKEASAQVVFGSVQS
VARNLDAFDGAFSLLIIDECHRVSLDDDSQYHQVLGHLKATNPALKILGLTATPYRLGLG
WIYRRHYHGMVKSHGERLFGDCVFELPLRFMVKNGYLTPPRMIDAPIVHYDFSKLVAREN
GLFSEADLNGELKRQQRVTPHILNQVLEYARERQGVMIFAATVEHAREIQGLLQAKSQTA
ALVTGETPGPERDALIHAFKGREIKFLVNVAVLTTGFDAPHVDLIVMLRPTESVSLYQQI
VGRGLRLSPGKTDCLVLDYAGNNFNLFAPEVGEPRPHAGTEPVQVPCPACGFANTFWGKT
DEEGKVVEHYGRRCQGLFEDDEGHREECDYRFRAKICPACGAENDIAARRCQSCDQLLVD
PDDKLKEALNLKDCMVIRCAGLTLTAGRGKQGERLEVTYHDEDGLTLTEYFAFHTSGARR
LFQQRFVRHHWPAPGLEPEFTTLASVLAVSNQFRHPDFVIARKSGRFWQVKEKIFDYEGR
YRTANSLA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
ttgtggccccaagatccctataatggcgccatcctgcgccgcaccatgtccaaacaccac
cccctcatgttcgttctcagaccctatcaaaccgacgccgtcaacgccgtgatcagccac
tttcgcaagcacccggatcccgccgtggtggtgctgcccaccggggcgggcaagagtctg
gtgatcgccgaactggcccgcaaggcccgtggtcgggtgctggtgctggcccacgtcaag
gagctggtggagcagaaccacgccaagtacgaggcctggggactcaaggccgacatcttt
gccgcagggctcgctcgcaaggaggcgagtgcccaggtggtgttcggctcggtgcagtca
gtggcgcgcaatctggacgccttcgacggggctttttcactgctcatcatcgacgagtgc
caccgggtttcgctcgatgacgacagccagtaccatcaggtgttaggccatctcaaggcc
accaatccggccctcaagatcctcggcctcaccgccacgccctatcgactagggctgggc
tggatctaccggcgccactaccacggcatggtcaagagccacggcgagcggctgtttggc
gactgcgtattcgagctgccgctgcgtttcatggtcaaaaatggctacctgacgccaccg
cgcatgatcgatgcccccatagtccactacgacttcagcaagctggtggcgcgggagaac
ggcctgttcagcgaggcggatctcaacggcgagctcaagcgccagcagcgggtcaccccc
catatcctgaaccaggtgctggagtatgcccgcgagcgccaaggggtgatgatcttcgcc
gccaccgtcgaacacgcccgggaaatccaggggctactgcaggctaaatcccagaccgcg
gccctcgtcaccggcgagacgccggggccggagcgcgatgctctcatccatgccttcaag
gggcgggagatcaagttcctggtcaacgtggctgtgctcaccaccggcttcgatgctcca
cacgtcgatctcatcgtgatgctgcgccccacggagtcggtgtcgctctatcagcagatc
gtcgggcggggcctgcgcctctcgccgggcaaaaccgattgtctggtgctcgactacgcg
ggcaacaacttcaacctgttcgcccccgaggtgggggagcccagaccccacgctggcaca
gagccggtgcaggtgccctgccccgcctgcggctttgccaacaccttctggggtaagacc
gacgaggagggcaaggtggtcgagcactacggccgccgctgtcaggggttgtttgaagat
gacgagggccaccgcgaggagtgcgactaccgctttcgcgccaagatctgtcccgcctgc
ggcgccgaaaacgacatcgccgcccgccgctgccagagctgcgatcagctgctggtggat
cctgacgacaagctcaaggaagcgctcaatctcaaggactgcatggtgatccgctgcgcc
ggcctcaccctcactgcagggcgcggcaaacagggggaacggctggaggtgacctaccac
gacgaggacggtctcaccctgacagagtacttcgcctttcataccagcggtgcacgacgc
ttgtttcaacaacgctttgtgcgtcatcattggcccgccccgggcctggagcccgaattc
accaccctggcgagcgtgctggccgtatcgaaccagtttcgtcacccggatttcgtcatc
gcccgcaagtctgggcgtttctggcaggtgaaggagaaaatttttgactatgaagggcgg
taccgcactgccaactcactcgcctag
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