Aeromonas media: B224_1633
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Entry
B224_1633 CDS
T03075
Name
(GenBank) GGDEF/EAL domain-containing protein
KO
K18765
RNase E specificity factor CsrD
Organism
amed
Aeromonas media
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amed03019
]
B224_1633
Messenger RNA biogenesis [BR:
amed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B224_1633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
Motif
Other DBs
NCBI-ProteinID:
AHX60445
LinkDB
All DBs
Position
complement(1260365..1262002)
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AA seq
545 aa
AA seq
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MLNKHEGNLLLVSALVCIPMLLLQGLWLTPPVSPLTLLLVLMTTIIGFAMLLFLTHSVRK
GERARQEQRWLLALQQRDPAMLDSPQAQTALRQLLASFSEAELDAHRQISELHNQATRDE
MTGLRNRHAFRRDLTELLQQENTQTAILVLVRATELGKLNAQRGFQSGDAYIKDIASLIT
HTVSRFPGHQVYRISGADFAVLMPPLAQIPPHLLGRDLKLAFDRYQHEHELDSAAYSGMT
RLSSEQKIEAILARADLALARAQTEAVNGWAIQQSDEVVELQGQRHWTQVLTDLLEQESI
SFTCQPIQPLHRGMQAYHEIYPRFCSSDGTTLPSDTLHAMAQRLDMVLRLAQMVIRHVIR
QYRAFGGHNSRWGLNLPGTLLQNSAFLIWLDHQLQKDPDISANLVFEIDEEHLERNLTGA
RRLFELLRRHGSRSAICNFGKGIGSFSLFRELKPDYIKLDPGLITELEQDLTNQQFVRMI
VDVSHRMGSLVIAEGVEQIGQKQMLQGMYVDGLQGYLIARPQELGPEMSQMAFFTESVST
SAGSE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataaacacgagggaaatctgctgctggtcagcgccctggtctgcattcccatg
ctgttgctgcaggggctctggcttacgcccccggtctcccccctcaccctgctgctggtt
ctgatgaccaccatcattggctttgccatgctgctctttctcacccacagcgtgcgcaag
ggggaacgggcgaggcaggagcagcgctggctgctggcgctgcagcagcgggatcccgcc
atgctggacagcccgcaggcacaaacggcgctacgccagttactcgcctccttcagtgaa
gccgaactcgatgcacaccgccagataagcgaactgcacaatcaggcgacccgggacgag
atgacgggcctgcgcaaccgccatgcgttcaggcgcgatctcaccgaactgctgcaacag
gagaatacccagaccgccatcctggtgctggtccgtgccaccgagcttggcaagctcaac
gcccagcgcggcttccagtcgggggatgcctacatcaaggacatcgccagcctcatcacc
cacacggtgagccgcttccctggccatcaggtctatcgtatctcgggggccgacttcgcg
gttctgatgccaccgctggcccagatccccccccacctgctggggcgagatctgaaactc
gccttcgatcgctatcagcacgaacacgagctggacagtgccgcctactcgggcatgacc
cggctcagcagcgaacagaagatagaggccatcctggcccgagccgatctggcgctggcc
cgtgcccagacggaagcggtcaacggctgggccatccagcagagtgacgaggtggtcgag
ttgcaggggcagcgtcactggactcaggtactgaccgatctgctggagcaggagagcatc
agctttacctgccagcccatccagcccctgcatcgcggcatgcaggcctatcacgagatc
tacccccgcttttgcagcagcgacggcaccacgctgccgagcgacaccctgcacgccatg
gcccaacgtctggacatggtgctgcgcctggcgcaaatggtgatccgccacgtcatccgt
caataccgcgccttcggtggtcacaacagccgctggggcctcaacctgccgggcaccttg
ctgcaaaacagcgccttcctcatctggctcgatcaccagttgcaaaaagaccccgacatc
agtgccaacctggtgttcgagatagatgaggaacatctggagcgcaacctgacgggggcg
aggcggctgttcgagttgctcaggcgccacggcagccgctcggccatctgcaactttggc
aaggggataggctccttcagcctgtttcgtgagctcaaacccgactacatcaagctggac
cccggcctcatcaccgagctggagcaggatctgaccaaccagcaattcgtgcggatgata
gtcgacgtctcccatcgcatgggcagtctggtgatagcggaaggggtcgagcagataggg
cagaagcagatgctgcaaggcatgtacgtagacgggttgcaggggtacctgatcgcacgg
ccccaggagctgggaccggagatgagccagatggcgttttttacggagagcgtttcaact
tcagcagggtcagaatga
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