Aeromonas media: B224_2027
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Entry
B224_2027 CDS
T03075
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
amed
Aeromonas media
Pathway
amed03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B224_2027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amed03400
]
B224_2027
DNA repair and recombination proteins [BR:
amed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B224_2027
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B224_2027
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Kinesin
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
AHX60733
LinkDB
All DBs
Position
1589991..1592003
Genome browser
AA seq
670 aa
AA seq
DB search
MNKPFKLASQFQPAGDQPAAIARLLDGIESGLAHQTLLGVTGSGKTFTMANVIATLNRPT
MILAPNKTLAAQLYGEMKEFFPENSVEYFVSYYDYYQPEAYVPTTDTFIEKDASINDHIE
QMRLSATKALLERRDVVIVASVSAIYGLGDPQAYLSMMLHLKVGDVINQRDILRRLAELQ
YTRNDMAFQRGTFRVRGEVIDIYPAESDKLALRVELFDEEVERLSQFDPLTGAIEQTVVR
YTIYPKTHYATPRETILGAIDHIKEELKGRREQLLSLNKLVEEQRISQRTQFDIEMMQEL
GYCSGIENYSRYLSGRAPGEPPPTLFDYLPGDGLLIIDESHVTVPQIGAMFKGDRSRKET
LVEYGFRLPSALDNRPLKFDEFEALMPQTVFVSATPGPYELEKSGGDVVQQVVRPTGLLD
PEIEVRPVTTQVDDLLSEIRLRVAVEERVLVTTLTKRMAEDLTEYLADHDVRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTRSLIQTIG
RAARNLNGKVILYGDTITNSMKVAIEETERRRALQHAHNLEHGITPKGLNKSVGDVMDMG
GSRTAGKPGRGSRKAAEPQGEYHARSASEIAKEIKRMEEQMFQHARDLEFEQAAAMRDQI
QRLRGELIES
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcctttcaagctggccagccagtttcaacccgcgggggatcagcctgcggcc
atcgcccgcctgctcgatggcatcgagtccggcctcgctcaccagactctgctcggggtg
accgggtcgggcaagaccttcaccatggccaacgtcatcgccaccctgaatcgcccgacc
atgatactggctcccaacaagaccctggccgcccagctctatggggagatgaaggagttc
ttccccgagaactcggtggagtacttcgtctcctattacgactactaccagccggaagcc
tatgtgccgaccacggacaccttcatcgagaaggatgcctccatcaacgatcacatcgag
cagatgcggctgtcggccaccaaggcgctactggagcggcgagacgtggtgatcgtcgcc
tcggtatctgccatctatggtctgggggacccccaggcctacctcagcatgatgctgcac
ctgaaggtcggggatgtgatcaaccagcgggatatcctgcgccgcctcgccgagctgcaa
tacacccgcaacgacatggccttccagcgcggcaccttccgggtgcggggggaggtgatc
gacatctaccctgccgaatcggacaagctggcactgcgggtggagctgttcgacgaggag
gtggagcgcctctcccagttcgatcccctgaccggtgccatcgagcagaccgtggtgcgc
tacaccatctaccccaagacccactacgccacgccgcgggagaccatcctcggggccatc
gatcacatcaaggaagagctcaagggacgccgcgagcagttgctctccctcaacaagctg
gtggaggagcagcgcatcagccagcgcacccagttcgacatcgagatgatgcaggagctg
gggtactgctccggtatcgagaactacagccgctatctgtcggggcgtgcccccggcgag
ccgccgcccaccctgtttgactacctgccgggggatggtctgctcatcatcgacgagtcc
cacgttactgtgccgcagataggcgccatgttcaaaggggatagatcccgcaaggagacc
ctggtggagtacggcttccggctcccctcggcgctggacaacagaccgttgaagtttgac
gagttcgaggccctgatgccccagacagtgttcgtctcggcgacccccggcccctacgag
ctggagaagtccggcggcgacgtggtgcaacaggtggtgcgtcccaccggcctgctggat
cccgaaatcgaggtgcggcccgttaccacccaggtggacgatctgctctccgagatccgg
ctgcgggtggcggtggaggagcgggtgctggtcaccaccctcaccaagcggatggcggaa
gacttgaccgaatacctggcggaccacgacgtgcgggtgcgttacctgcattcggacatc
gacacagtggagcgggtggagatcatccgtgatctgcgtctgggcaaattcgacgtgctg
gtgggcatcaacctgctgcgagaagggctcgacatgccggaggtctccctggtggccatc
ctggatgcggacaaggagggcttcctgcgctccacccgttccctcatccagaccattggc
cgcgccgcccgcaacctcaacggcaaggtcatcctctacggcgataccatcaccaactcc
atgaaggtggccatcgaggagaccgagcggcgccgtgccctgcagcatgcccataacctg
gagcacggcatcacgcccaaggggctcaacaagtcggtgggggatgtgatggacatggga
ggcagccgcaccgccggcaaacccggcagaggcagtcgcaaggcggccgagccgcaaggg
gagtaccatgcccgctccgccagcgagatcgccaaggagatcaagcggatggaagagcag
atgttccagcatgcccgggatttggagttcgagcaggccgccgccatgcgggatcagatc
cagcggttgcgcggcgagttgatcgagtcatga
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