Aeromonas media: B224_2221
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Entry
B224_2221 CDS
T03075
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
amed
Aeromonas media
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amed03016
]
B224_2221
Enzymes [BR:
amed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B224_2221
Transfer RNA biogenesis [BR:
amed03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B224_2221
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
AHX60875
LinkDB
All DBs
Position
1743206..1744318
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AA seq
370 aa
AA seq
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MQYQLISQQAELEQYLASLADVPLAIDTEFVRTRTYYPQLGLFQIYDGERLALLDPLTLD
LSGLWQRLGRAGQIAILHASGEDLELIQHQAGHLPNQMHDTQLATAFLGYGVSVGFGALV
KEFLGVELEKDQARTDWLARPLTARQLEYAAADVFYLMPLYEKVMARLHESGKFAWFEQE
CQNHSARKTQGSDPRQAYLEIINAWQLGRRELAILRELAAWRQQEAVRRDLALNFVVKEL
HLFKVAERRPTSLRDLNELGLAPIEIKIHGKRMLDIVTSAQQSDPDSWPEPIRRLVDFPQ
YKAELKRIKAMVEEKAKASNIPPELVASKKIIHQYFTWSWRMSAEERARADKPMLLQGWR
HELVGHLLAQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatcaactcatttcacagcaagccgaactggagcagtatctcgcttccctggcc
gacgttcccctggccatagataccgaattcgttcgcacccgtacctactatccccagctc
ggtctgttccagatctatgacggcgaacgcctcgctctgctggatccgctgactctggat
ctctccggcctgtggcagcggctcggccgggcagggcagatcgccatactgcacgcctcc
ggtgaagatctggagctcatccagcatcaggcgggccacctgcccaaccagatgcatgac
acccagctcgcgacggccttcctggggtacggcgtctcggtgggcttcggcgccctggtg
aaagagttcctcggggtggaactggaaaaggatcaggcccgcaccgactggctggcccgc
cccctgaccgcgcgccagctcgaatacgcggcggcggatgtcttctacctgatgcccctc
tacgagaaggtgatggccaggttgcatgaaagcggcaagtttgcctggttcgagcaggag
tgccagaaccactccgcccgcaagacccagggcagcgatccccgtcaggcctacctcgag
atcattaacgcctggcaactgggtcggcgcgagctggccatcctgcgcgagctcgccgcc
tggcgtcagcaagaggcggtgcgccgggatctggccctcaacttcgtggtcaaggagctg
cacctgttcaaggtggcggagcgccgacccacttcattgcgggatctcaacgagctgggg
ctggcccccatcgagatcaagatccacggcaagcggatgctggacatcgtcacctcggcc
cagcagagcgatccggacagctggccagagcccattcgccggctggtggacttcccccag
tacaaggccgagctcaagcgcatcaaggccatggtggaagagaaggccaaggccagcaac
attccgccggagctggttgccagcaagaagatcatccaccagtacttcacctggagctgg
cgcatgagcgccgaggagcgggcacgcgccgacaagcccatgctgctgcaaggctggcgt
catgagctggtggggcatctgctggcccagtaa
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