Aeromonas media: B224_3796
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Entry
B224_3796 CDS
T03075
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
amed
Aeromonas media
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amed03400
]
B224_3796
DNA repair and recombination proteins [BR:
amed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B224_3796
Archaeal homologous recombinant proteins
B224_3796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
Tropomyosin
ABC_ATPase
ABC_tran
nSTAND3
AAA_21
HIM1
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
AHX62017
LinkDB
All DBs
Position
complement(2996063..2999827)
Genome browser
AA seq
1254 aa
AA seq
DB search
MKILSLAGENLASLTGAFTIDFAGGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR
FIANRKHVAEVGRADDEEKLKANDVRGILSRGHASGCAEVKFRGCDGRIWLARWAVRRAR
NRSEGRFQAQERSLTDVESGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL
KSSADERSALLERMTGTELYSAISIQTHERARAEQQALATIQQRLGDVALMDDETREHWV
AQQLSLSTSLKHEQQQRQLLQDLRDLNGRIAAQLQACREGQEALIAAEAAHGEAAPGREE
FARAEQAQVARADHDELARLTLEVQQQEQQIGQLAPQLEQVEPVLQQAALREQQLLADKI
AAEREWGALQPELKRAQELDTRLKEKSQQLQETRQQGTQARALQLELQQEWHQQASRVEA
LTVRRQQWALWLEERKALAPLARQWQPLLATIQDWAADRELLQRVLQSREHKDHALRDLA
SRLAQGQQERDDWQQEQARLQQQQHELQEQQWEIRVAKAQEQWQQQTEQLGQLHQLLELA
DYGRNHGEQHGRLQQEIAQLEQALSRLTTLGGELAPARERLALQRDEARHALEQSRAIAS
FEQYRHILNDGEPCPLCGAEEHPYSQSQPQVAGILGQLADRSRSLELEWERLNHQYIQCE
SERQELARQLAARRQHLPELDARAEQLTLRWQQLGGAKLLGHPLPLNQNQADSLTKWSEL
MSTLLSRGQTLEHGLAQSQQQLREAQFGQQQLQAVRQQLSQLTARHQQFEQQWQEAERQK
VEWEAELKALAEQEASLRQRLAQGEARLDQQMGAEPWRQWLGSQQWLAWQQTCEEYLHGQ
NEWEQLGGELATLTPVLSAQEARLQSQNELLHKLERDYKEAEQQRQGLLASREACLGGRA
ITLIEQEWQQRLQLAASQLEEAVTALRVAREKQTELKARLAHLEQDRQVSSRRRREALGR
WAAHAGTLGIAEYDLRRLLAITPDELRARRSALQRLDDALAEARTRLAERQRALAQEEAK
LARYREHHGELTALTAEALAECLGACEARCRELEEQLFQCKSTLAQAEAAALKAGSLQED
LAAQQAVADHWLQLSELIGSASGAKLRTFAQSLTLERLLLEANAQLGELSPRYRLERVPG
TDLALQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTL
DPDSLDLALSSLDSLQAAGRQIGVISHVQTLVERIGVQIRVEALGGGESRVVLP
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttgtctcttgcaggggaaaacctggccagcctgaccggggctttcaccatc
gacttcgccggtggcgctttgggggctgccgggctctttgccatcaccggtaatacaggc
gcgggcaagagcaccttgctcgacgccatctgcctcgccctctatgacgagatgccgcgc
ttcatcgccaatcgcaagcacgtggccgaagtgggcagggcggatgacgaggagaagctc
aaggccaacgacgtgcgcggcatcttgagccgcggccacgccagcggctgtgccgaggtg
aagttccgcggctgcgacggccgcatctggcttgcgcgctgggcggtacgccgtgcccgc
aatcgctcggaggggcgcttccaggctcaggagcgcagcctgaccgacgtcgagtcgggg
caggtcttctccggcagcaagcgggagctgcaggatcgcatcgacgagctggtgggcctc
tcctgggagcagttccgccgcgccgtcatcctgccccaaggggagttcgccgccttcctc
aagtcgagcgccgatgagcgctccgccctgctcgagcggatgacgggcaccgagctctac
tccgccatctccatccagacccatgagcgggcacgggccgagcagcaggcgctggcaacc
atacagcagcggctcggtgacgtggccctgatggacgacgaaacgcgcgagcactgggtc
gcccagcagctgagtctctccaccagcctcaagcacgagcagcagcagcgtcagctgttg
caggacttgcgggatctcaacggacggattgccgcccagttgcaggcctgccgggagggg
caggaggcgctgatcgccgccgaggcagcccatggcgaggcggcgcccgggcgggaagag
tttgcccgcgccgagcaggcccaggtggcccgcgccgatcacgacgaacttgcccgcctc
accctggaggtgcagcagcaggagcagcagataggccaacttgcgccccagctggagcag
gttgaacccgtgttgcagcaggccgcgctgcgcgaacagcagctgctggccgacaagatt
gccgcagagcgggagtggggcgccctgcaacccgagctcaagcgggcgcaggagctcgat
acccggctcaaggagaagagccagcagttgcaggagacccggcagcaggggacccaggca
cgcgccctgcaactggaactgcagcaggagtggcatcagcaggcgagccgggtcgaggcc
ctgacggtgcgccgtcagcagtgggctctgtggctcgaggagcgcaaggccctggccccg
ctggcgcgccagtggcagcctttgctggcaaccatccaggactgggcggcggacagggag
ctgctacagcgcgtgttgcaaagccgcgagcacaaggaccatgccctgcgggatctcgcc
agccggctggcgcagggacagcaggagcgcgacgactggcagcaggagcaggcgcgattg
cagcaacagcagcacgagttgcaggagcagcagtgggagatccgcgttgccaaggcgcag
gagcagtggcagcagcagaccgaacagctgggccagctgcatcagttgctggagctggct
gattatggtcgcaatcacggcgagcagcatggccgtttgcagcaggagatcgcccagctg
gagcaggccctgagccggctgaccacgctcggcggcgagctggcgccggcccgagagcgg
ctcgccctgcagcgagacgaggcgcgccacgcgctggagcagtctcgcgccatcgccagt
ttcgagcagtatcgccacatcctgaacgatggtgaaccttgtcccctctgcggcgccgag
gagcacccctacagtcagagccagccgcaggtggcgggcattctgggtcagctggcggat
cgatcccgcagtctcgagctcgagtgggagcgactcaatcatcaatacatccagtgcgag
agcgaacgccaggagctggcacgccagctggcggcgcgccgccagcatctgccggagctg
gatgcccgcgccgaacaactgaccttgcgttggcagcagctcggcggtgccaagttgctg
ggtcatccgttgccactgaatcagaatcaagccgattccctgaccaagtggagcgagctg
atgagtaccctgcttagccgtggccagactctggagcatgggctggcccagagccagcag
caactgcgtgaggcccagttcggccagcagcagttgcaggccgtgcgccagcagctgagc
cagctgaccgcccgccatcagcagtttgagcagcaatggcaggaggcggagcggcagaag
gttgagtgggaggccgagctgaaggcactggccgaacaggaggcatccttgcgtcagcgc
ctggcacagggtgaggcccgtctcgatcaacaaatgggggccgagccctggcgccagtgg
cttggtagccagcaatggctggcgtggcagcagacctgcgaggagtatctgcacggacag
aatgagtgggagcagcttggcggcgagctggccactctgaccccggtcttgagtgcccag
gaggcgcggctgcaaagccagaacgagctgctgcacaagctggagcgcgactacaaggag
gcggagcagcagcgtcaggggttgctcgccagccgggaggcctgcctcgggggccgcgcc
attaccctgatcgagcaggagtggcagcagcgattgcaactggcggccagtcagctcgag
gaggcggtgacggcactgcgggtcgcccgggagaagcagaccgagctcaaggcgaggcta
gcccatctcgagcaggacaggcaggtgagcagccgtcgtcgccgcgaggcgctggggcgc
tgggcggcccatgctggcactctcggcatcgccgaatatgatctgcgtcggctgctggcc
atcacgccggatgagctcagggctcgccgcagcgccttgcagcgcctggatgatgccctg
gccgaggcccgcacccggttggccgagcgtcagcgggcgctggcccaggaggaggccaag
ctggcgcgctatcgggagcatcatggggagctgaccgccctcacggccgaggcccttgcc
gagtgtctgggcgcctgcgaggctcgctgccgcgagctggaagagcagctgttccagtgc
aagagcacgctggcccaggccgaggcggcggcgctgaaggcggggagcctgcaggaggac
ttggcggcccagcaggcggtggcggatcactggctgcaactgtccgagcttatcggctcc
gccagcggcgccaagctgcgcaccttcgcccagagcctcacgctcgaacgtctattgttg
gaggccaacgcccagcttggcgagctgtcgccgcgctatcgactggagcgggtgcccggc
acggatctggcgctgcaggtggtggatctggacatgggggacgaggtgcgctccgtggac
tctctctccggcggcgagagcttcctggtgtcgctggcgttggcgctggcgctctccagc
ctgtcgtcgcgccagacccaggtcgagtcgctcttcatcgacgaggggttcggcaccctg
gatccggacagcctggatctggcgctctccagcctggactccctgcaggcggcgggccgc
cagatcggggtcatctcccacgttcagaccctggtggagcggatcggcgtgcaaataagg
gtcgaggccctcggtgggggagagagccgggtggtgttgccctga
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