Aeromonas media: B224_3798
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Entry
B224_3798 CDS
T03075
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
amed
Aeromonas media
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amed03400
]
B224_3798
DNA repair and recombination proteins [BR:
amed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B224_3798
Archaeal homologous recombinant proteins
B224_3798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Motif
Other DBs
NCBI-ProteinID:
AHX62018
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Position
complement(2999824..3001050)
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AA seq
408 aa
AA seq
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MKILHTADWHLGHQLHGHERRFEHDAFLDWLTNTIKTRQIDALLVAGDLFDTANPPASAW
QQLYRFLARLRAEMPHLNMVLIGGNHDSPSKLDAPHELLRAFDLHLVGSISRDGEGKLET
DRLLVPLQDKEGKVAAWCAAVPFLRSSDLRVEPLEEGQDRLIEGVRQIYQDVLAQGRTRC
EPGQALIAMGHAYLAAGQLSELSERRVLGGNQHALPADIFAAADYTALGHLHLAQSPAEG
VHYSGSPLPLSLAEANYNHQVLEVRFEGGKLAGLERIPVPRAVEMIRLPQGTLEEALKAI
EALSLPDCPQEAQPFLEVRLLLPKPEARIRERILAAMAGKPVRLARISTQYQGSGEGLAD
GRERRRLDELAPTEVFRLCYQRQFDGEPAAELVASFEEILEQVKESNP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctgcacacagccgactggcaccttggccatcaactccatggccatgagcgc
cgcttcgaacacgatgcctttctcgactggctgaccaacaccatcaagacgcggcagatc
gacgccctgctggtagcaggggatctgttcgataccgccaatccgccagccagcgcctgg
cagcagctctatcgttttctggccaggctgcgcgccgagatgcctcacctcaacatggtg
ctgatcggcggcaaccacgactccccctccaagctggacgccccccacgagctgctgcgg
gccttcgacctgcatctggtgggcagcatcagccgggacggggagggcaagctcgagacc
gatcgcctgctggtgccgttgcaagacaaggagggcaaggtcgccgcctggtgcgctgcc
gtgccttttcttcgcagcagcgatctgcgggtggagccgctcgaagaggggcaggatcgg
ctgatcgagggggttcgccagatctaccaggacgtgctggcgcaaggccgcacgcgctgc
gagcccggccaggcgctcatcgccatgggccacgcctacctggcggcgggccagctatcc
gagctctccgagcggcgggtgctggggggcaatcagcatgccctgcctgccgacatcttc
gccgccgccgactacacggcccttggccacctccatctggcccagagcccggccgagggg
gtgcactacagcggctcgccgctgccgctctccctcgccgaggccaactacaaccaccag
gtgctggaggtcaggtttgaggggggcaagctggcggggctggagcggatccccgtgccc
cgagcggtggagatgatccgcctgccccagggcacactcgaggaggcgctgaaagccata
gaggcgctctccctgcctgactgccctcaggaggcgcagcccttcctcgaggtgcggctg
ctgctacccaaacccgaggcgcgcatccgcgagcgcattctggcggccatggcgggcaag
ccggtgcgcctcgcccgtatcagcacccagtatcagggctcgggagaggggctggccgat
ggccgcgaacggcgcaggctggatgaactcgctcccacagaggtgtttcgcctctgctat
cagcggcagttcgacggggagccggcggccgagttggtggcgtcgtttgaagagatcctg
gagcaggtgaaggaatccaacccatga
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