KEGG   Aeromonas media: B224_3888
Entry
B224_3888         CDS       T03075                                 
Name
(GenBank) Holliday junction resolvase
  KO
K01159  crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
Organism
amed  Aeromonas media
Pathway
amed03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amed00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    B224_3888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amed03400]
    B224_3888
Enzymes [BR:amed01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.10  crossover junction endodeoxyribonuclease
     B224_3888
DNA repair and recombination proteins [BR:amed03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     B224_3888
    RecFOR pathway proteins
     B224_3888
SSDB
Motif
Pfam: RuvC DUF3882
Other DBs
NCBI-ProteinID: AHX62078
LinkDB
Position
complement(3061105..3061626)
AA seq 173 aa
MSIILGIDPGSRITGYGVIRIVAGKAEYLGSGCIRTDLGELPSRLKQVYDGVSEIITQFK
PDEFAIERVFMARNADSALKLGQARGSAIVAAVNALLPVSEYSATQIKQAVVGTGGAAKE
QVQHMVTHLLKLSATPQADAADALGVALCHFHTRQSLIRMAGRATSSVRGRYR
NT seq 522 nt   +upstreamnt  +downstreamnt
atgagcattattctgggcatagaccccggctcccggatcactggctacggcgtcatccgc
atcgtcgcgggcaaggcggaatacctgggctcgggctgcatccgcaccgacttgggcgag
ctgccgtcccgcctcaagcaggtgtatgacggggtgagcgagatcatcacccagttcaag
ccggacgagttcgccatcgagcgggtcttcatggcgcgcaatgcggattcggccctgaaa
ctcggccaggccaggggcagcgccatcgtcgcggcggtcaacgccttgctgccggtgagc
gaatactcggcgacccagatcaagcaggcggtggtgggcacgggcggcgccgccaaggag
caggtgcagcatatggtgacccatctgctcaagctgtcggccaccccccaggcggatgcg
gcggatgccctcggggtggcgctctgtcacttccacacccgccagagtcttatcaggatg
gcgggacgagccaccagttcggtacgtggtcgctatcgctga

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