Aeromonas media: B224_4629
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Entry
B224_4629 CDS
T03075
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
amed
Aeromonas media
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amed03009
]
B224_4629
Enzymes [BR:
amed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B224_4629
Ribosome biogenesis [BR:
amed03009
]
Prokaryotic type
rRNA helicases
B224_4629
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHX62600
LinkDB
All DBs
Position
complement(3617094..3618317)
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AA seq
407 aa
AA seq
DB search
MSQSFDDFDLNPALNRALAEMGFTRPTTIQQMVLEPALDGRDILASAPTGTGKTAAFLLP
AMQHLLDFPRRKPGPCRMLILTPTRELALQVSAHARALAVHTHLSIETIIGGVSHEEQLP
ALTKTTDIVVATPGRLLEYIEKEEFESHDIEVLVLDEADRMLDMGFIKDVNRIVEEARYR
KHTMLFSATLEGAGLTKFANEILNDPVELHAEPPRSERRPITQWVHLADDAAHKLALLIH
ILKDPQTQKAIVFVKTRERLAELSGQLQAAGVSCAWIRGEMEQSKRVESIRKFHEGEVPF
LIATDVAARGIDLPNVSHVINYDMPYGTDVYVHRIGRTGRAGNRGCAISLVEAHDMAMVA
KIERYTEERLKRRVIEELRPRHKEARVPVKKKKPKDGKKKSTKKKKK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcctttgatgatttcgacctgaatccagccctcaaccgggccttggccgag
atgggtttcacccgccccacaaccatccagcagatggtgctggagccagccctggacggc
cgcgatattctggcatccgcgccgaccggtaccggcaagaccgccgccttcctgctgcca
gccatgcagcatctgctggacttcccgcgccgcaagccgggcccgtgccgcatgctgatc
ctcaccccgacccgcgagctggcactgcaggtcagtgcccatgccagggcgctggcggta
catacccatctcagtatcgagaccatcatcggtggcgtcagccatgaagagcaactgccg
gccctgaccaagaccaccgacatcgtggtggccactccgggtcgcttgctcgagtacatc
gagaaggaagagttcgagagccacgatatcgaggtgctggtgctggatgaagcggaccgc
atgctggacatgggcttcatcaaggatgtgaaccgcatcgtggaagaggcgcgttaccgc
aagcacaccatgctgttctccgccaccctggaaggagccggcctgaccaaatttgccaac
gagatcctcaacgatccggtcgagctgcacgccgagccgccccgcagcgagcgtcgtccc
atcacccagtgggtgcacctggccgatgacgcggcccacaagctggcgctgctgatccat
attctgaaggatccgcagacccagaaggccattgtcttcgtcaagacccgcgagcggctg
gcggagctctccggccagttgcaggcggccggtgtttcctgtgcctggatccgtggcgaa
atggagcagagcaagcgcgtcgagtcgatccgcaagttccacgaaggtgaagtgcccttc
ctcatcgccaccgacgtggccgcccggggtatcgacttgcccaacgtcagccacgtcatc
aactacgacatgccctacggcaccgatgtctatgttcatcgcatcggccgtaccggccgt
gccggcaaccgtggctgcgccatcagcctggtggaagcccacgacatggccatggtggcc
aagatcgagcgctacaccgaggagcggctcaagcgtcgggtgatcgaggagctgcgcccg
aggcacaaggaggcgcgagtgccggtgaagaagaagaaaccgaaggatggcaagaaaaag
agcaccaagaagaaaaagaagtaa
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