Aeromonas media: B224_5824
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Entry
B224_5824 CDS
T03075
Name
(GenBank) glycogen debranching enzyme
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
amed
Aeromonas media
Pathway
amed00500
Starch and sucrose metabolism
amed01100
Metabolic pathways
amed01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
B224_5824
Enzymes [BR:
amed01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
B224_5824
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
Isoamylase_C
ISOA1-3_C
GlgX_C
Motif
Other DBs
NCBI-ProteinID:
AHX63447
LinkDB
All DBs
Position
complement(4551665..4553806)
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AA seq
713 aa
AA seq
DB search
MFVMENGVDYPLGARLDEAGCHYCVWAPQSDKVELCLFDEQEQELVRLALPGQRGQYRFG
YVRGVRAGQRYGYRVHGTPQEGMLFDPDKLLIDPYARALSRATRWDDDLYQGDSAAMVAK
SVVVDDAFDWQGIGKPGILPERVVLYETHVKGFTRQHPGVPEALRGTYLGVSHPLMIEHL
LSLGVTSVQLMPVAAFMSEPRLEQLGLTNYWGYNPIAFFAPEPRYGAGEAVTEFKTMVRE
LHRAGLEVILDVVYNHTAESGADGPMLSLKGFDNAGYYAFETGAHGPDYHRHANVTGCGN
SVNLDHPNSLRLVLDALRYWVTEMQVDGFRFDLAVTLAREAGEFDPMSAFFKAMLADPVL
ARVRLIAEPWDIGPFGYRLGQFPSQWLEINDRYRDTVRAFWRGDAGKMGDFATRLAGSRD
FFPKNWRSPHTSVNYLCYHDGFTLEDLVSYNQRHNQANGEDNRDGHGNNLSYNHGVEGPT
LDPRVNNLRQQQKRNLIATLLLSQGTPHFLAGDEMGRSQLGNNNAYCQDNQISWVNWQLR
PEDERLLAFTRQMMALRAESGVFANLQLSDDEWNGKATSCHSVNWYHPDGHQLTDQDWHA
PMGQAFAMDIGMLTCGGERWYVLFNASDYDIQFRLPPPGEGLEWIQTIDTATNDGLPFLP
DDIKRQVAVGRAHSLKLLERVALPAVALAKEGVVATPDVAAVLPTGSQFPLAG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtaatggaaaatggggtggactacccgctgggggcccggctcgacgaggccggc
tgccactactgcgtctgggccccccaatcggacaaggtggaactctgtctgttcgacgag
caggagcaggagctggtccggctggccctgcccggccagcgcggtcaataccgcttcggt
tatgtgcgcggggtgcgggctggtcagcgttacggttaccgggtccatggcacgccccag
gagggcatgctgttcgaccccgacaagctgttgatcgacccctatgccagggcgctcagc
cgggcgacccgttgggatgacgacctctatcagggggacagcgcggccatggtggccaag
tcggtggtggtggacgatgccttcgactggcaggggatcggcaagcctggcatcctgccc
gagcgggttgtgctctacgagacccacgtcaagggcttcacccgtcagcatcccggggtg
cccgaggcgctgcggggcacctacctcggcgtcagccatccgctgatgatcgaacacctg
ctgtcgctgggggtcacctcggtgcaactgatgccggtggccgccttcatgtcggaaccc
aggctcgaacagcttgggctgaccaactactggggctacaaccccattgccttcttcgcc
ccggagcctcgttatggcgccggagaggcagtgaccgagttcaagaccatggtgcgcgag
ctgcaccgtgccgggctcgaggtgatattggatgtggtctacaaccacaccgccgaatcc
ggtgccgatggccccatgctgtcgctcaaagggttcgacaacgcgggttactacgccttc
gagaccggggcccatggcccggactatcaccgtcacgccaacgtcaccggctgtggcaac
agcgtcaatctggatcaccccaacagcctgcgactggtgctcgatgccctgcgctactgg
gtcaccgagatgcaggtggatggtttccgcttcgatctcgcggtcaccctagcgcgggag
gcgggggaattcgatcccatgagtgccttcttcaaggccatgctggcggatcccgtgctg
gcgcgggtgcggctgatcgccgaaccctgggatatcggccccttcggctatcgcctcggc
cagtttccgagccagtggctggagatcaatgaccgctatcgcgataccgttcgcgccttc
tggcgcggggatgcgggcaagatgggggactttgccacccggctggctgggtcgcgggat
ttcttcccgaagaactggcgctccccccacaccagcgtcaactacctctgctatcacgat
ggcttcaccctggaggatctggtctcctacaaccagcgccacaaccaggccaacggcgaa
gacaacagagacggccacggcaacaacctctcctacaaccacggggtggaggggccgacc
ctggaccccagagtgaacaacctgcgccagcagcagaagcgcaacctcattgccaccctg
ctgctctcccagggcacgccccacttcctggccggggacgagatgggtcgcagccagctt
ggcaacaacaacgcctattgccaggacaaccagataagctgggtcaactggcagttgcgg
ccagaggatgaacggctgctcgccttcacccgccagatgatggcgctgcgggcggagtcc
ggggtcttcgccaacctgcaactcagtgacgatgagtggaatggcaaggcgaccagctgt
cacagcgtcaactggtatcaccccgatggccaccaactcaccgatcaggactggcacgcc
cccatggggcaggcgttcgccatggacatcggcatgctgacgtgcggtggggagcgctgg
tatgtgctgttcaacgccagcgactacgacatccagttccgcctgccgccgccgggggag
gggctggagtggatccagaccatagacaccgccaccaacgacggcctgcccttcctgcct
gacgacatcaagcggcaggtggcagtcgggcgcgcccactccctcaagctgctggagcgg
gtcgcgctgccggcggtggcgctggccaaggaaggggtggtcgccacgccggatgttgcc
gccgtgttgccaacgggatcacagttcccgctggcggggtag
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