Aeromonas media: B224_6074
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Entry
B224_6074 CDS
T03075
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
amed
Aeromonas media
Brite
KEGG Orthology (KO) [BR:
amed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amed03019
]
B224_6074
Messenger RNA biogenesis [BR:
amed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B224_6074
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
Motif
Other DBs
NCBI-ProteinID:
AHX63630
LinkDB
All DBs
Position
complement(4757630..4759549)
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AA seq
639 aa
AA seq
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MKLTTQLVSFITLCVIAAMAVVMLGGVFSFRQMGMELQQNRVDSLVEIIDKQLGVTDDQQ
ALARWLPSLLRASHVVELEIRQDRQRVYWFRDVQQQTDESLLIPYSKAIPNQVGMQAEFK
LDRPFKEFEYSMQAMFGISLGVFIVVFGLWYSIRWLRQQLRGAELLAERAQLILDGKLTK
LAHDPADEWPLPASQALTHLLAELADARKERSRFDNFIRSNAFVDKTTGIGNRLFFDNRL
ENAIMEASVISGGVLLIELAGLEELDPELSGRPSQDLLMEASASIGAFVRKHSGALQARY
AGQVFAVLLPNMSESEMVDGASQLLKSLQRLHWPEPVNLDTAVYLGAVCYQAEDSLLKVQ
EEAELALKSARLQGHSGWFLYEKSLDEEASNKGTVRWRTLINRRIEERGISFYLQPVQQE
RDQVVLQQELLIRIHDEQGRELQAGVFMPMAEKAGLLLPLDRLVVAQTLRLLRQRPESSC
PVCLSLSAQNLLNREFQRDLFFELFQLPRSLNEGLILQLSESQVTRHYEALKRPLRALRM
LGCRLAIDHAGQDVVSTQYIKEFEINFLKLHPSLVREIHLRQVNQMAVRSLVGGCANTQT
RVIAVGVESGDEWKMLRHLGVHAGQGPWFAEPQRLIMPA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgactactcaactcgtctcctttattaccctgtgcgtgatcgcggccatggcc
gtggtgatgctgggcggggtattcagtttccgccagatggggatggagctgcagcagaac
cgggtcgactccctggtggagatcatcgacaagcagctgggagtgaccgacgatcagcag
gccttggcccgctggctgccctccctgctgcgggcttcccacgtggtcgagctggagatc
cgccaggacaggcagcgggtctactggtttcgcgacgtacaacaacagaccgacgagagt
ctgctgatcccctacagcaaagccattcccaatcaggtcggcatgcaggccgagttcaag
ctggacaggccgttcaaggagttcgagtactccatgcaggccatgttcggcatctccctc
ggggtcttcatcgtggtgtttggcctctggtattccatccgctggttgcgccagcagttg
cgtggtgccgagctgctggcggagcgggcccaactgatcctggatggcaaactcaccaag
ctggcccatgatcccgccgacgaatggcccctccccgccagccaggcgctcacccatctg
ctggccgagctggccgatgcccgcaaggagcgtagccggttcgacaacttcatccgcagc
aacgccttcgtcgacaagaccaccggcatcggcaaccgcctcttcttcgacaaccggctg
gaaaacgccatcatggaggcgagcgtgatcagtggcggtgtcctgctgatcgagctggcc
gggctggaggagctggatcccgaactgagcggacgcccgagtcaggatctgctgatggag
gcgagcgcctccatcggcgccttcgtgcgcaagcacagcggtgccctgcaggcccgctac
gccggccaggtctttgccgtgctgctgcccaacatgtccgagagcgagatggtggacggc
gccagtcagttgctcaagagcctgcagcgcctgcactggcccgagccggtcaatctggac
acggccgtctatctcggtgccgtctgttatcaggccgaggactccctgctcaaggtgcag
gaagaggccgagctggcgctcaagagtgcgcgcctgcagggtcacagcggctggttcctc
tacgagaagtcgctggacgaggaggcgagcaacaaggggacggtgcgctggcgcaccctg
atcaaccgccgcatcgaggagcgggggatctccttctatctgcaaccggtgcagcaggag
cgggaccaggtggtgctgcaacaggagctgctgatccgtattcatgacgagcaggggcgg
gagttgcaggcaggagtcttcatgcccatggcggagaaggccggcctgctgctgccgttg
gaccggttggtggtcgcccagacccttcgcctgctgcgccagcggccggagtcgagctgc
cccgtctgcctgtcgctcagtgcccagaacctgctcaatcgcgagttccagcgggatctt
ttcttcgagctgttccaactgccgcgcagcctcaatgaggggttgatcctgcagttgtcg
gagtctcaggtgacccgccactacgaggcgctcaagcggccactgcgggcgctgcgcatg
ttgggatgccggctggccatcgatcacgcgggccaggatgtggtgagcactcagtacatc
aaggagttcgaaatcaacttcctcaagctgcaccccagcctggtgcgggagatccacctg
cgacaggtcaaccagatggcggtgcgcagcctggtgggtggttgcgccaatacccagacc
cgggtgattgcggtcggggtggagagcggcgacgagtggaagatgctgcgtcatctcggc
gtgcacgcgggccaggggccctggttcgccgagccacagcggctgatcatgcccgcctga
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