Peptoniphilus sp. GNH: LV469_01460
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Entry
LV469_01460 CDS
T07804
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
amei
Peptoniphilus sp. GNH
Pathway
amei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LV469_01460 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amei03400
]
LV469_01460 (priA)
Enzymes [BR:
amei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LV469_01460 (priA)
DNA repair and recombination proteins [BR:
amei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LV469_01460 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_3primeBD
Helicase_C
Zn_ribbon_PriA
AAA_30
WHD_PriA_bact
PriA_C
HTH_24
Zn_ribbon_6
Sigma70_r4
FilR1_N
AAA_19
WHD_PriA
PF0610-like_N
HTH_26
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
UHR02978
LinkDB
All DBs
Position
281810..284179
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AA seq
789 aa
AA seq
DB search
MEKFVQVFIKTKYGAIDRKWTYKIPDFLQENIFPGQRVLVPFGKGNVPTLAMVLAYTDTD
ESDFQAKEILDYIDPEPILTKDLIDLGIFMHNTYLIGLSKTFMPLMPPGDFKEIWHEISP
ADGWETDEEVKHILKGKSMLIKFSELGQEKAQIKRLIKEKKLKSKIVVKSKNTFKYEKYL
KLTSDISKEIKDLKLTDTQEKVIVLLRKGEISRKDLMARLGISQSPINSLEKKGLIQLYD
KKILRTGKKDYENEKRFPLNIEQIRAIDGIKNSPKSINLLKGITGSGKTEVYLRLTEDVV
KRGGQVIVLVPEISLTPQMIERFKKRFGNKVSVMHSKMSKGARFDEWSRIKSSEVSVLVG
VRSGIFAPFENLQLIIIDEEHDSSYRQHSSLKYDTYEVAKKRIEILGGKLLIGSATPSVE
RYYEALNGKIGLFELNSRAGLQAKLPEVRLINMTQELFAGNTSIFSRELRFKLEDNFNSG
NQSILFLNRRGYSNFVSCRECGYVVKCDSCDISMSYHKTIGRLRCHYCGKTKPLPKVCPS
CGSKYIKSFGVGTQQVQEEVKKILPAAKILRVDRDTVGAGDFFDKSFEDFKSGAYDIMIG
TQMVAKGHDFPNVTLVGVVAADLSLYVSDFRAHEQTFQLLTQVSGRAGRGRKSGEVIIQT
YSPDDYSIKASADTDYEEFFEKEINIRKLYDYPPFSAIFTISFAKDEPINLENIALQVLS
EIGQEIKGFKTSYTKVIDMPKIKDVYKVKFLLKCKRENSDMLLSIIKRVKERNEDNLANE
KIYIDVEYD
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatttgttcaagtttttataaaaactaaatatggtgcaatagatagaaagtgg
acatataaaattccagattttttacaagaaaatatatttccaggtcagagagttctcgta
cctttcggaaagggaaatgtcccgacacttgctatggtcttagcatatacagatacagac
gagtcggattttcaagccaaggaaattttagattatattgatccagagccgattctcaca
aaggatcttatagacttgggaatttttatgcacaatacttatcttattgggctatctaag
acatttatgcctcttatgcctcctggagacttcaaagaaatttggcatgaaatttctcct
gctgatggctgggaaacagacgaggaagtaaaacatattttaaagggcaagtctatgctt
ataaaattttcggagttaggacaagaaaaggcgcaaataaaaagactaataaaagaaaag
aagttaaaatcaaaaattgtagtaaagagcaaaaatacttttaaatacgaaaaatatttg
aagctcacaagtgatatttcaaaagaaataaaagacttaaagcttacggacactcaagaa
aaagtaatagttttgctaagaaaaggggaaatttcaagaaaagacttgatggcgagattg
gggatttctcaatcaccgataaattctctagaaaagaagggtcttattcagctttacgat
aaaaagattttaagaacaggtaaaaaagattacgaaaatgaaaagagatttcctttaaat
atagaacaaataagagccatagacggaataaaaaattcgcctaagagcataaatttgcta
aagggcatcacaggctctggaaagactgaggtttatttaagacttacagaagatgtagta
aaaagaggcgggcaagtaatagttctggttccagagatatctttgactccacagatgatc
gaaagatttaaaaaaagatttggaaacaaagtttctgttatgcattctaagatgtctaaa
ggagcaagatttgacgagtggtcaagaataaagtcttcggaagtgtctgtacttgtagga
gtgaggtctgggatttttgcaccttttgaaaatttgcaattaatcataattgatgaggag
cacgattcgtcttatagacaacactcatccttgaaatatgacacttatgaagtggctaaa
aaaagaatagaaatattaggaggcaagcttttaataggctctgcaacaccgtctgtggaa
cgctattatgaagctttgaatggaaagattgggctttttgaattgaattcaagggctggt
ctccaagcaaaattgccagaggttagacttataaatatgactcaggagctttttgcaggc
aacacttcgattttttcaagagaactgagattcaagcttgaggataacttcaactcaggc
aatcaatccattttatttttgaatagacgaggatattcaaacttcgtatcgtgtcgggag
tgcggatatgtggtgaagtgtgattcttgcgatatctctatgagttatcataagaccatt
ggaaggttgagatgccattattgtggaaaaactaaacccttgccaaaagtttgtccttca
tgtgggtccaaatatataaaaagttttggagtcggcactcaacaagttcaagaagaggta
aagaagatattgcctgctgcaaaaattttgagagttgatagagatacagttggggcagga
gatttttttgacaagtcatttgaggatttcaaatctggagcttatgatatcatgatagga
acgcaaatggttgcaaaaggacacgattttccaaatgtaactttggtaggtgtcgtagca
gctgacttgtctctttatgtttcagattttagagcgcatgaacaaacttttcagcttttg
acacaagtttctggaagggcaggcagagggcgaaaatcgggcgaggtaataattcagaca
tatagtccggacgattatagcattaaagcctctgctgatacggactatgaggagtttttt
gaaaaagaaataaatattagaaaactctatgattacccgcctttttcagcgatttttact
atttcatttgcaaaagatgaacctataaatttggaaaacattgccttgcaagttttaagt
gaaataggacaggagataaaagggtttaaaacgtcttatacaaaagtaatagatatgccc
aaaattaaagatgtatataaagttaaatttctattgaaatgcaagcgtgagaattcagat
atgttattatcaattataaaaagggtaaaagaaagaaacgaagataatttggcaaatgaa
aaaatttatatagatgttgaatatgattga
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