Peptoniphilus sp. GNH: LV469_03330
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Entry
LV469_03330 CDS
T07804
Name
(GenBank) PASTA domain-containing protein
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
amei
Peptoniphilus sp. GNH
Pathway
amei00550
Peptidoglycan biosynthesis
amei01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amei00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LV469_03330
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amei01011
]
LV469_03330
Peptidoglycan biosynthesis and degradation proteins [BR:
amei01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LV469_03330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
Orf78
Motif
Other DBs
NCBI-ProteinID:
UHR03339
LinkDB
All DBs
Position
complement(635770..638115)
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AA seq
781 aa
AA seq
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MKLFNRFRNKKKKSDKGSNKKSFSANANRKIIFILVILTFLIVVIFSKLFYLQVLVSDKY
TRLALRQITGTEVLNSERGIIYDRNLKELALNVACADAYYNMDPDANPKNDKESLSEYEA
RYKSDLEADAEKIAAICSVNKEELLEKMKGEKPVKILSDVERSKTLELRDAGIRRLSLED
KMKRSYPYKNLGSHVIGFVNDENIGQYGVESGFDSILSGISGKIFKYRQGGGGRIPLTDQ
ETFAPKEGLFLGLTMDINIQQIAEEAAREAKARFSAEKVSIIVQDTQNSEILAMANIDDY
DLNKPREPQTPEQREIWPELTDQQKVEMWFKNWRNFAVNDIYEPGSTFKLVTAASAIEAG
TSWPDKTYYCTGAITDIPGVKRIGCTCTIRGAKTMAQALEQSCNISFVQLGRELGRQNML
HFIRAFGFGERTGIELPAEEKGKIPASVEAIGPAELATLSYGHGIACTPLQLINAVSAIA
NGGELNVPRIGKTLMDADGNVIETFKTQKVRQVISKSTSKTMLGLMERVVLNGTGKRAKV
DGYRVGGKTGTANMISENGNGYAQGKYVASFVGVAPINDPKITVLVVVKDPQGLTHGGTV
AAPYGSYVIGKTLSYLKVQRTEGINQQKDANLVQVPDVSNLLIQDAGKALVTRGLKFNVT
TENSSGTSVVKGQSVEAGAYVKQGTIIDLEVENNMGSDRVMPNLIDKTKEEAISILKDLK
VEYNAIGEGIVKSQTPKAGSVLNKDTMVDLEFDSEDKADELIKKSGSKGLVKDAGKDDIT
D
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactatttaatagatttagaaataaaaagaaaaagtcagacaagggaagcaataaa
aaaagtttttcagcaaatgcaaatagaaaaataatttttatcctggttattctgactttt
ttaattgttgtgattttttcaaaattattttatttgcaagtccttgtttcggacaagtac
acaagacttgcccttagacaaattacaggaactgaggtcttaaactctgaaagaggaata
atttacgacaggaatttaaaagagctggcccttaatgtggcatgtgctgacgcttattac
aatatggatccggatgccaatcctaaaaatgacaaggagagtttatcggaatacgaagct
agatacaagtctgacttggaagccgatgcagaaaaaattgctgctatatgttcggtaaat
aaagaagaactattagagaagatgaagggtgaaaaaccagtaaaaatcctctctgatgtc
gaacgctccaagaccttagagcttagagatgctggtataagaaggctttctttagaagat
aagatgaaaagatcttatccttacaagaacttgggttctcatgtcattggctttgtaaat
gatgaaaacataggccaatacggagttgaatctggctttgatagcatactaagcggcatt
tctgggaaaattttcaagtacagacaagggggaggcggtcgtattccgcttacagatcaa
gagacctttgcacctaaagagggactttttttaggccttaccatggatataaatatccaa
caaatagctgaagaagcggcaagagaagccaaggcaagattttctgcagaaaaagtatcc
ataatagtccaagatactcaaaactcagagattttggctatggctaatatagatgactat
gatttgaacaaaccaagagagccacaaacacctgagcaaagagaaatttggcctgagctt
acagatcaacaaaaggtggaaatgtggtttaaaaactggagaaattttgccgtaaatgac
atatatgaacccggttctacttttaaacttgtgacggctgcatctgccatagaagcgggc
acttcttggccagataagacttactattgtactggggccataacagatatacctggtgta
aagagaataggttgtacttgcacaataaggggagccaagaccatggcacaagccttggaa
caatcttgtaacatttcctttgtgcaattgggaagagagcttggcagacaaaatatgctc
catttcataagggcctttgggtttggagagagaactggaatagagcttcctgccgaggaa
aaaggaaagattccagcaagtgttgaggcaataggacctgcagagcttgccaccttatcc
tatggacatggtatagcttgtacaccgcttcaacttataaatgcagtttctgcaattgcc
aacggaggagaattgaatgtgccgagaatcggaaagactttaatggatgctgatggcaac
gtcatagagacttttaaaacacaaaaggtaaggcaagtgatttcaaagtcaacctccaag
accatgctcggacttatggaaagagttgtcctaaatggtactggtaagagggccaaggtt
gatggatatagagtcggaggaaaaactggtactgcaaatatgatatcagaaaatggcaat
ggatatgctcaaggcaagtatgtggcttcttttgtgggtgttgctcctataaatgatccc
aagataactgtacttgtagtcgtaaaagatccgcaaggcctaacccatggtggtactgtt
gctgcgccatatggttcatatgtgattggaaaaactctttcttatttgaaggtccaaagg
acagaaggcataaatcaacaaaaagatgccaacctcgttcaagtgccagatgtttcaaac
ttgttgattcaagatgctggcaaagcacttgtgacaaggggcttgaaatttaatgtgaca
actgaaaattcatctggaacatctgttgtcaaaggccaatctgttgaggctggagcctat
gtaaaacaaggcacgataatagatcttgaagtggaaaacaacatgggtagcgatagagta
atgccaaatttaatagataagaccaaggaagaggctataagtattttaaaagacttaaaa
gtagagtataatgcaataggtgaaggcattgtaaaatcacaaactccaaaagcgggcagt
gtattaaataaagacactatggtggatttggaatttgattctgaggataaggcggatgag
ctgataaaaaaatcaggctcaaagggtcttgttaaagatgccggaaaagatgacataaca
gactag
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