Peptoniphilus sp. GNH: LV469_04230
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Entry
LV469_04230 CDS
T07804
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
amei
Peptoniphilus sp. GNH
Pathway
amei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LV469_04230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amei03400
]
LV469_04230
Enzymes [BR:
amei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LV469_04230
DNA repair and recombination proteins [BR:
amei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LV469_04230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
AAA_22
SLFN-g3_helicase
PIF1
T2SSE
UvrD-helicase
DEAD
HHH_2
AAA
nSTAND3
AAA_5
AAA_28
NTPase_1
NPHP3_N
HHH_3
HerA_C
AAA_16
MeaB
AAA_29
Zeta_toxin
SRP54
ATPase_2
TrwB_AAD_bind
nSTAND_NTPase5
NAT10_TcmA_helicase
RsgA_GTPase
ABC_tran
AAA_14
TsaE
AAA_18
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
UHR03500
LinkDB
All DBs
Position
complement(854734..856932)
Genome browser
AA seq
732 aa
AA seq
DB search
MEIRGIIDKIFFNNEENGYIVFKLLTEDTDITCTGSAIGIKEGREYKLDGDFIFHKKYGE
QFSFDKIEEVLPEEQDAIIAYLASGNIPFVGKRMAKRIVEKFKEDTFKILEENPRRLLEI
EGIGEKKLEKIKEAFAEQKGLRDAFVFFEEFGISQTDANKIYRVYGNLSIERVKENPYKL
AEDIRGFGFKKADELARKMGFSKDSEMRIKSCIKYILKMALLEGHCFLPEDTVTSSINKM
ISVSYQALEMAMERLILDREIFIKKDGDSKSIYFTKIYKAENFAAGKLISLLDGSDRELN
LLELDAKIESIEADSHKFAKKQKLAIREAVTKKVCLITGGPGTGKTTTLRAILEILESMG
KKVSLAAPTGRAAKRMEESTGRKASTIHKLLDIHSDFYTDDLEELNADVVIIDEFSMVDL
LLFNTLLTALKEGAGLIMVGDKDQLPSVGAGNVLRDIIKSGVISSVNLDEIFRQEKESLI
VKNAHLINEGKMPFLNERGGDFFFVNKSSMENISREIVNLVTERLPNYYGLDPKKDIQVL
SPIKKTPIGVHNLNKLLQEALNPKKHGDELKVGDQIFRKDDRVMQMKNNYQLEYEVEFTG
NFEQGIFNGDTGIVEEVNSDEGYLVVRYDENKLATYSLKDAEELSLSYAITIHKSQGSEY
PLVIIPMTFVPPILANRNLIYTAVTRASKLVVLVGEQKYLRMMVENNKTRLRYSSLALRI
LEAREKYDFFKK
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
ttggaaataaggggaattatagacaaaatattctttaataacgaagaaaatggctacata
gttttcaaacttttgacagaggacacagacatcacttgcacaggaagtgcaattggcata
aaagaaggcagagagtacaagttagatggcgatttcatttttcacaaaaagtatggagaa
cagttttcctttgataaaatcgaagaggttttgccagaggagcaagatgccataattgcc
tatttggcttctggaaatattccctttgtgggcaaaagaatggccaagaggattgtggaa
aaattcaaagaggacacttttaagattttagaagaaaatcccagacggttacttgaaatt
gaaggtataggcgaaaaaaagctagaaaagataaaagaggcatttgcagagcaaaaaggg
cttagagatgcctttgtgttttttgaagaatttggcatttctcaaactgatgccaataaa
atttatagagtttatggcaacctttcgattgaaagagtgaaggaaaacccctacaagttg
gcagaggatataaggggatttggatttaaaaaagcagatgaacttgcgcggaaaatgggg
ttttccaaagattcagagatgagaataaaatcttgcataaaatacattttaaaaatggcc
cttctagaaggacactgctttttgccagaagacacagttacatcaagcataaacaagatg
atctctgtatcttatcaagccttggaaatggctatggagaggctgattttagacagggag
attttcataaaaaaagatggtgattcaaaatctatctatttcaccaaaatatataaggca
gaaaattttgctgccggcaagcttataagtcttttggatggtagtgatagggagcttaat
ctcttagagttagatgccaaaatagagagtatagaggctgatagtcataaatttgctaaa
aagcaaaagctagccataagagaagctgttactaagaaagtatgtcttataactggagga
ccgggaacgggcaagacgacaactctaagggcgatacttgaaattttagagagcatgggt
aagaaggtttcattagcagctccaacgggtcgggctgcaaagagaatggaagaatccacc
ggcagaaaggcctcaacaattcacaagcttctggatatacattcggatttttacacagat
gacttggaagaactgaatgccgatgtagtgataatagatgaattttcaatggtagacttg
cttctttttaacactcttttgacagccctaaaagagggggcaggtcttataatggtgggg
gacaaggaccaacttccttctgtgggagctggaaatgtcctaagagatattataaagtcg
ggtgtcatatctagtgtgaatctggacgaaatttttaggcaggaaaaggaatctcttata
gtaaaaaatgcccatcttataaatgaggggaaaatgccttttttaaatgaaaggggagga
gattttttctttgtaaataagtcttcaatggagaacataagtagagaaatagtgaacttg
gtaacagagagattgccaaattattatggcttagatcccaaaaaggatattcaagtgcta
agtcccataaaaaaaactcctataggagtccacaatctgaacaaattgttgcaagaagct
ttaaatccaaaaaaacatggcgacgagttaaaggttggagatcagatttttagaaaggac
gatcgggtaatgcagatgaaaaataattatcagctggagtacgaggtcgaatttactgga
aattttgagcaggggatttttaatggggacactggaatagtcgaagaagtgaattctgac
gagggctacttggttgtgagatatgatgagaataagcttgccacatatagtctaaaagat
gcagaggagcttagcctttcgtatgccataacaatccacaagtcgcagggcagcgaatat
cctcttgttattattcctatgacttttgtgccgccaattttggcaaatagaaatttaatc
tatacggcagttactagggcttcgaagctagtagttcttgtgggtgagcaaaaatatttg
aggatgatggtcgaaaacaacaagaccagacttaggtattcttcattggcgcttagaatt
ttagaggcgagggagaaatatgattttttcaaaaaataa
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