Peptoniphilus sp. GNH: LV469_04575
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Entry
LV469_04575 CDS
T07804
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amei
Peptoniphilus sp. GNH
Brite
KEGG Orthology (KO) [BR:
amei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amei03032
]
LV469_04575 (topA)
03400 DNA repair and recombination proteins [BR:
amei03400
]
LV469_04575 (topA)
Enzymes [BR:
amei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LV469_04575 (topA)
DNA replication proteins [BR:
amei03032
]
Prokaryotic type
DNA Topoisomerases
LV469_04575 (topA)
DNA repair and recombination proteins [BR:
amei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LV469_04575 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_3
Zn_Ribbon_1
DUF6085
DUF1936
Toprim_2
CK_II_beta
Zn_ribbon_RPB9
Ribosomal_L44
Motif
Other DBs
NCBI-ProteinID:
UHR03566
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All DBs
Position
complement(925338..927422)
Genome browser
AA seq
694 aa
AA seq
DB search
MATNLVIVESPTKAKTIKKILGKSYKVMASVGHIRDLPKSTLGIDIEKDFEPKYINIRGK
GDLIKELKKEAKNSKNIYLATDPDREGEAIAWHLAHILDLDPKDKVRVAFNEITKKTVTD
EIKSPRSIDLDLVDAQQGRRVLDRLMGYKISPILWKKIKSGLSAGRVQSVALKIICDREQ
EIRDFVAEEFWTLEAELSKEKKKKKFTALYYGRRVDGKEEKVEPKKEEEVKRILKRIDKE
NFLIEEIKDGTAKRSPQKPFTTSTLQQEASRRLNFKTKKTMMIAQRLYEGIEIKGKGSIG
LITYMRTDSTRVSDEAKAKCLAFIADEYGKDYLGYERRGKNQKGAQDAHECIRPADPFIT
PYSIKDYLSKDEFKLYSLIHQRFVASMMKDAAFKTQAVKINSNDEIFKARGRVLIFDGFL
KAYSYGQEKDDLLPDLEEGERLKLWDLKEEQKFTQAPPRYNEASLIKYLEEKGIGRPSTY
APTISTIQSRYYVVLEDKKFLPTELGEAVNDLLSKYFKDMVNIDFSADLEESLDEIAEGK
KQWKNLVEDVYSSLSKDLERADEDAKKVEVRDEVSDVICEKCGRNMVIKIGRFGKFLACP
GFPECRNAKPLVEKIGVKCPKCKDGEIVKRRSKKGRIFFGCSNYPDCDFVTWNKPVDKFC
PKCGKILTEVITRKSKMLKCSDSNCDYSEAVDEK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaatcttgtaattgtggagtcgcctacaaaagcaaagacgattaaaaaaatt
ttgggaaaatcttataaagttatggcatcagtcggtcatataagagatcttcccaagtca
accctaggaatagatatagaaaaggactttgaacccaaatatataaatataaggggcaag
ggagatcttataaaggaactaaagaaagaggccaaaaactctaaaaatatttatttggca
actgaccctgatagggaaggcgaggcgattgcttggcatttggctcatattttagatttg
gaccccaaggataaggtgagggttgcctttaatgaaatcacaaaaaagacggtcacagat
gaaataaaaagccccaggtccatagatttggatttggtagatgcccaacaaggtagaaga
gtcctagacaggcttatgggttacaaaatttcgcccatactttggaaaaaaataaaaagt
ggtctttctgctggcagggtgcagtctgtagctcttaaaataatttgcgacagagaacaa
gaaataagagactttgtagcagaagaattttggaccttggaggccgagctttcaaaagaa
aagaagaaaaagaaatttactgctctttactatggaagaagggtagatggcaaagaagag
aaagttgagccaaaaaaagaggaagaagtaaagcggattttaaaaagaattgataaggaa
aatttcttaatagaagaaatcaaggatggcactgctaaaaggtctccccaaaagcctttc
acaacatcaaccctgcaacaagaggcttccagaaggctcaattttaaaactaaaaaaact
atgatgatagcccaaaggctttatgaaggaattgaaataaagggcaagggttctattggt
cttataacttatatgagaacagactctaccagagtatcggatgaagccaaggccaagtgt
cttgcttttatagcggatgaatacggaaaagactatctcggatatgaaagaagaggcaaa
aatcaaaagggagctcaggatgcccatgagtgtataagaccggcagatccctttattaca
ccttattctataaaagattatttaagcaaggatgagtttaagctttacagcttgatacat
caaaggtttgtggcatctatgatgaaggatgcagcatttaaaacgcaggctgtaaaaata
aattcaaatgacgagatatttaaagcaagaggtcgggttttgatttttgatggtttctta
aaggcctattcctatggacaagaaaaggatgaccttctaccagacttggaagagggtgaa
agattaaagctttgggatttaaaagaagaacaaaaatttacccaagctcctcctagatac
aatgaagcgtctcttataaagtatttggaagaaaagggaataggtaggccatcgacttat
gcaccgacaatttccaccatccaatctcgctactatgtagtgttagaagataagaagttc
ttgccgactgaattgggagaagctgtaaatgatcttttgagcaaatattttaaagatatg
gtaaatattgatttctcggctgacttggaagaatctttagacgagattgccgagggcaaa
aaacaatggaaaaatttggtagaagatgtctactcctctctatctaaggacttagaaaga
gccgatgaggatgccaaaaaggtcgaagtcagagatgaggtttctgatgtgatatgtgaa
aagtgcggccgcaacatggtgataaaaattggcagatttggcaaatttttagcttgtcca
ggctttccagaatgtagaaatgccaagccacttgtagaaaaaataggagttaaatgcccc
aagtgtaaggatggcgagatagtaaagagaagatccaaaaaagggagaatattctttggt
tgctctaattatccagactgtgattttgtaacatggaataagccagtcgacaaattttgc
ccaaaatgcggcaaaatccttacagaagtcattacaagaaaaagtaaaatgttaaaatgt
tctgactccaattgtgattatagtgaggcagtagatgaaaaataa
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