Peptoniphilus sp. GNH: LV469_08640
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Entry
LV469_08640 CDS
T07804
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
amei
Peptoniphilus sp. GNH
Pathway
amei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LV469_08640 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amei03400
]
LV469_08640 (uvrB)
DNA repair and recombination proteins [BR:
amei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LV469_08640 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LV469_08640 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
DUF87
SWI2_SNF2
AAA_30
TrwB_AAD_bind
AAA_7
AAA_22
Microtub_bd
AAA_16
DUF1351
Motif
Other DBs
NCBI-ProteinID:
UHR02689
LinkDB
All DBs
Position
1806691..1808658
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AA seq
655 aa
AA seq
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MEFKIHSKFKPMGDQVAAIESLVDGVKKNLKHQTLVGVTGSGKTFTMANIIERVQKPTLV
IAHNKTLAYQLVGEFKEFFPENAVEYFVSYYDYYQPEAYVPQTDTFIAKDSSINDEIDEL
RHSATMALFERKDVIIVASVSCIYGLGDPIDYKKLTVSLRPGMQRSRDDIMRHLVDIQYV
RNDINFVRGTFRVRGDVLEIFPAASSENSIRVEFFGDEIDRIAEMNALTGEVLSYKNFVS
IWPASHFATSKDKVDKAIISIREELEERLKELKDQEKLLEAQRLEQRTEYDLEMLSEMGF
CSGIENYSRHLSQRPAGSRPYTLIDYFPKDFLTIIDESHATIPQIRGMFNGDRSRKETLV
NYGFRLPSALDNRPLRFNEFESMMNQSIYVSATPGPYEKEHEENRTEQVIRPTGLLDPKI
YVRPSKNQIDDLINEIEKQKEKGYRTLVTTLTKKMAEDLTDHFKEMGIKVTYMHSDVDTI
ERMEIIRDLRLGVYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTAGRAA
RNVDSYVVMYADTITKSMQVTIDETNRRRKIQAAYNEKNAIVPKSVSKGIREIVSTHIAA
EERVGYDEDDFDPEEIKAMIEGLRIEMLKSAELLDFERAAEIRDEIKNLKQMLER
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaaaatacattcaaaatttaaacccatgggcgaccaggtagcagcgattgaa
tctctagtcgatggtgtgaagaaaaacttgaagcatcaaactcttgtcggtgttacaggc
tcgggcaagacttttacaatggcaaatataatagagagggtacaaaagccgactctagta
atagcacataataagactctagcctatcaactagttggtgagttcaaagagttttttcca
gaaaatgctgtggagtattttgtttcttattatgactattatcaaccagaagcttatgta
cctcaaacagatacttttattgccaaggattcttctataaatgatgagatagacgaactc
agacactctgcaaccatggccttgtttgaaagaaaagatgtgataattgtcgcatctgta
tcttgtatttatggtctaggagaccccatagattataaaaagttaaccgtttctctaaga
ccaggtatgcagaggtctagagatgatataatgcgacatttggtcgatattcaatatgtc
agaaatgatataaactttgtgagggggacttttagagtaaggggcgatgtgcttgaaatt
ttccctgcagcatcgtctgaaaactcaataagagttgaattttttggagacgaaatagat
cggatagcagagatgaatgccctcacaggagaagtgctttcgtataaaaattttgtgagt
atatggccagcatcccactttgctacatccaaggacaaggtggataaggctattataagt
ataagagaagagcttgaagaaagactaaaagagctaaaggaccaagaaaaacttctggag
gcccagaggctggaacagaggacagagtacgatttagaaatgctttctgagatgggattt
tgttctggaatagaaaattattctcgccacctttctcaaagacctgctggctcaaggccc
tatactctcatagattattttcctaaggattttcttactataattgatgaatcacacgcc
acaattccgcaaataagaggaatgtttaatggcgataggtcaagaaaggaaaccttggtt
aattatggatttcgtttgccatcggctcttgacaataggcctcttagattcaatgaattt
gagtccatgatgaatcaatcaatctatgtttctgccacaccagggccatatgaaaaagaa
cacgaagaaaatagaactgagcaggttataagaccgacaggacttttagatcctaagatt
tatgtgagaccgagcaaaaatcaaattgacgatttgataaatgagatagagaagcaaaag
gaaaaaggctataggactttggttacaactctaaccaaaaagatggccgaggacttgaca
gatcattttaaagaaatgggaataaaagtcacctatatgcattctgatgtagatacaatt
gaaagaatggaaatcataagagatctaagactgggagtatatgatgtacttgtagggata
aatcttttaagagagggtctggacttgccggaggtttctttggttgctattttggatgcg
gacaaggaaggttttttaagaagtgaaacatccttgatacaaactgctggaagggcagct
agaaatgtggattcttatgtagttatgtacgctgacactataaccaagtctatgcaagtt
acaatagatgaaaccaaccgtagaagaaaaatccaagctgcctacaatgaaaaaaatgca
atagtgcctaaatctgtatctaagggcataagagaaattgtaagcactcatattgcagct
gaagaaagagttggatatgatgaggatgattttgatccagaagaaataaaagccatgatt
gagggacttaggatagagatgttaaagtcggcggaacttttagactttgaaagggctgct
gaaattagagatgagataaaaaatcttaagcagatgttggagagatga
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