Anopheles merus: 121588039
Help
Entry
121588039 CDS
T08889
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
amer
Anopheles merus
Pathway
amer03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
amer00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121588039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amer03021
]
121588039
03036 Chromosome and associated proteins [BR:
amer03036
]
121588039
Transcription machinery [BR:
amer03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121588039
Chromosome and associated proteins [BR:
amer03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121588039
PBAF complex
121588039
GBAF(ncBAF) complex
121588039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
121588039
NCBI-ProteinID:
XP_041761487
UniProt:
A0A182V668
LinkDB
All DBs
Position
2R:complement(29093378..29100151)
Genome browser
AA seq
1417 aa
AA seq
DB search
MEMVSLGPKKDGNPNAEFFTAPETLQNFETVRLWLQKHFKKFLAPDPPTKESLAHLIIQF
IQYQEAKLGKNSQDPPTTRLPIRCFMDFKPGGALCHILSTMYRYKAEQRWRKFDFTVNKN
PMRKDPIGQMVLDIETALIEAECMRLPIVYIRPEVDRATANKITDIVTNHQGEITVDEEE
ATHIIYPVIDPLPEDYARPTFRRDKHVMIHWYYFPESYDTWVPNSFDLPDNIPESPPSPA
ERWRVSASWVIDLDEYNEWMSEEDYEVDEGGRKKVHPHRLGVEDLISSVAGGGGGGASSE
DKVKKTPKVVNSKRKRSPSPAAGKGGKRKSYRSPAASSAASSFQKKPRADDEESEDLTKD
MEDPAPETNITEVKPNMGSSGASGPATPQPKRDPDMMPMKYATVTDLDDEMGMNAGGAGG
SGAGGGGGSGGSGAGVGGGDDSQAGKTSDSSNTQDFPTGSKDDLEDNVTEQTHHIIVPSY
SAWFDYNSIHVVEKRALPEFFNGKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRN
LAGDVCAIMRVHAFLEQWGLINYQIDADSRPTPMGPPPTSHFHVLSDTPSGLQPINPPKT
AQPSAAKNLLDLDKKGAVLGEKKDELAPGAAAAAAAGANGGAAPLIGPDGIKVEQGLVPT
ADPNGQFGLRLDQYAKKPAAMRNKTAASMTREWTEQETLLLLEGLEMYKDDWNKVCEHVG
SRTQDECILHFLRLPIEDPYLEDDNTFLGPLSYQPIPFSKAGNPIMSTVAFLASVVDPRI
AASAAKAAMEEFAAIKDEVPASMMDAHLKNVEKSSFGGKFDPNAGLASSGIAGTGAEKDK
EDESADGKTPASGGASSATSAAAGGSGAAVAALTPATPTPAAGDVEMKDVSKKDDAAEKE
KSSDETTTATKSPDSDATTATPAGDANAGKPPGAASDAPSASPDAKEKDGKDGKDAATSS
STGTDDAAKENGGSTDPKLFNEGNLQAAAAAALAAAAVKAKHLAAVEERKIKSLVALLVE
TQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQR
FQMEQGQWQQQQAQAQAQAQAQAQAQAQAQQQQQQQQQPPQGPAGPASAASTVSATHSNV
HPSQQQPPHLGGATTNPGANPPKPPSIAGGPGMGPGAPGPVHATNNPVQAAAAAAAAATA
APSALPATASLPPSASQAPPAGMPASNGIPPPTSSTPSSTQPPSTNPTDGITPNSIMPTG
GPAAPSGAAIPPPSPHSDPAAAAGAVTAPPGTVGIPPLGAPPSGPGSHQPSADQQQQQQQ
PPAAPVAAPAPTETLPPAPAAQTTGEGGMQPVTAMATATNPSPSSDGPGEQPAAPATAPD
TTPAATGASEQQQQQHQQDSGAAGEGPVGGPPAPPPS
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgtctctggggccgaaaaaggatggaaatcctaatgccgaattctttacc
gcgccggaaacactgcagaacttcgaaacggtgcggctgtggttgcagaaacacttcaag
aagtttcttgcaccagatccaccgacaaaggaatctttggcccatttaattatacaattc
attcagtatcaggaagcgaagcttgggaaaaactctcaagatccaccaacaacgcgttta
ccgatacgatgctttatggatttcaaaccgggcggtgccctctgccacatactttccact
atgtaccgctacaaggcggagcagcgctggcgcaagttcgatttcaccgtgaacaaaaac
ccgatgcgcaaggacccgatcgggcagatggtgctggacatcgagacggcactgatcgag
gcggaatgcatgcgcctgccgatcgtgtacatccgcccggaggtggaccgtgcgacggcg
aacaaaatcaccgacatcgtgacgaaccatcagggcgaaataacggtcgatgaggaagag
gccacgcacatcatctatccggtgattgatccgctgccggaggattacgcgcgacccacg
ttccggcgcgataagcacgtgatgatccactggtactacttcccggagtcgtacgacact
tgggtgccgaattcgttcgacttgcccgacaacatcccggagagtccaccgtcgccggcc
gagcgctggcgcgtgtccgcctcgtgggtgatcgatctggacgagtacaacgagtggatg
tcagaggaggactatgaggtggacgaggggggacgcaaaaaggtgcacccgcaccggctc
ggcgtcgaggatttgatctcgagcgtggccggcggcggtggcggtggggccagctcggaa
gataaggttaagaaaacgcccaaggtggtgaactcgaagcgcaaacggtcgccctcgccg
gctgccggcaagggtggcaagcggaagagttaccgttcgccggccgcttcgtccgctgcc
tcctccttccagaagaagccgcgcgcggatgacgaggagtcggaggatctcaccaaggac
atggaggatccggcgccggaaacgaacattaccgaggtgaagccgaacatgggcagctcg
ggtgcgtcgggcccggcaacgccgcagcccaagcgcgacccggacatgatgccgatgaag
tacgccaccgtgaccgatctggacgacgagatgggcatgaatgcgggcggcgctggtggt
agtggtgcgggcggtggcggtggcagtggtggatccggagcgggcgtgggcggtggcgac
gacagccaggcgggcaagacgagcgacagcagcaatacgcaggacttcccgaccggcagc
aaggacgatctggaggacaacgtgacggaacagacgcaccacatcatcgtgccgtcctac
tcggcctggttcgactacaactccatccacgtggtggagaagcgcgccctgcccgagttc
ttcaacgggaagaacaagtcgaagacgcccgaaatttacatggcctaccggaacttcatg
atcgacacgtaccggctcaatccgactgagtatctgaccagcacggcctgccgccgcaat
ctggccggcgacgtgtgcgcgatcatgcgcgtgcacgcgttcctcgagcagtggggcctg
atcaactatcagatcgatgccgattcccggccgacaccgatgggcccaccgccgacctct
cacttccacgtgctgagcgacacgccgtccgggctgcagccgatcaatccgcccaagacg
gcccaaccgtccgcggcgaagaatttgctcgatctggacaagaagggggctgtgctgggc
gagaagaaggacgagctggcaccgggtgcggcggcggcggcagcggcgggcgccaacggt
ggtgccgcgccactgatcggcccggacggcatcaaggtggagcagggtctcgtgccaacg
gccgatccgaacggccagttcggcctgcggttggaccagtacgcgaagaaaccggccgcg
atgcgcaacaagacggcggccagcatgacgcgcgagtggacggagcaggagacgctgctg
ctgctcgaggggctggagatgtacaaggacgattggaacaaggtgtgcgagcatgtcggg
tcgcgcacgcaggacgagtgcatcctgcactttctgcggctgccgatcgaggatccgtac
ctggaggatgacaacacgttcctcggtccgctctcgtaccagccgatcccgttcagcaag
gcgggcaatccgatcatgtcgaccgtggcgtttttggcctcggtggtcgacccgcgtatc
gcggccagcgcggccaaggcagcgatggaagagttcgccgcaatcaaggatgaggtgccc
gcttccatgatggacgcacacctgaagaacgtggagaaatcgagcttcggtggaaagttc
gatccgaatgcggggctggcaagcagcggtattgctggcacgggcgccgaaaaggacaag
gaggacgagtcggcggacggcaaaacaccggcaagcggtggagcgtcctcggcaacgtcc
gctgctgcaggtggttccggggcagcggtcgctgcgttgactcctgccacaccgaccccg
gcagctggcgacgtggagatgaaggatgtttcgaaaaaggatgatgctgccgaaaaagaa
aaatcttccgatgagacaaccactgctactaaatcgcctgattccgatgctactacagcg
acgccagcgggcgatgcaaacgccggcaaaccaccaggagcggccagcgatgccccgtcc
gcctccccagacgcgaaggaaaaggatggcaaggatggtaaggatgctgctacatcctcg
tcaacaggcacggatgacgcggcaaaggagaacggcggctccaccgatccgaagctgttc
aacgagggcaatctgcaggcggcagcagcggctgcccttgccgctgccgcagtgaaggcg
aagcatctggccgcggtcgaggagcgcaagatcaagagcttggtagcgctgctcgtcgag
acgcagatgaaaaagctcgagataaagttgcgccacttcgaggagctggagacgacgatg
gagcgcgaacgggaggggctggagtatcagcgacagcagctgatacaggagcgccagcag
ttccatctggagcagctgaaagcggctgagttccgggcgcgccagcaagcccaccagcgc
ttccagatggagcagggccaatggcagcagcagcaggcacaagcgcaagcgcaggcacag
gcacaagcgcaagcccaggcgcaagcacagcagcagcagcagcagcaacagcagccgcca
cagggtccggcagggccagcgtccgctgcctccaccgtatcggcgacccactcgaatgtg
catccgtcgcagcagcagccaccgcatctgggcggcgccaccaccaatccgggagctaat
ccgccaaagccgccatctatcgctggtggcccggggatggggccgggagcgcctggacca
gttcatgcaaccaacaacccggttcaggcggcggcggcagcagcagcagcagcaacagcg
gcaccatcagcactgccggcgacagcatccttaccaccatcggccagccaagcaccgccg
gccggcatgccagcgtccaacggtatcccccctcctacttcatccacccccagctctacc
cagccgccctctacgaatcctaccgacggcattacgccaaatagtataatgcccacgggc
ggaccggctgcaccatccggggcggctattccgcctccctcgccacacagcgacccagcg
gcggcggcgggtgcagtaacagcacctcccggaaccgtcggaattcccccgttgggggcg
cccccctctggccctggatcgcaccagccgtcggcagaccagcagcagcagcagcagcaa
cccccggcagcgccagtggcggcaccggctcctaccgaaaccctgcccccagcaccagca
gcgcaaacgacgggagaaggtggaatgcaaccggtcacggcaatggcgaccgccaccaat
ccgtctccatcgtcggacgggccgggagagcagccggcagcaccagcgacggctccggac
acgacaccggcggcgaccggtgcaagtgaacagcagcagcagcaacatcaacaggacagt
ggagctgccggtgaagggccagtcggtggtccgccagcaccgccaccatcataa
DBGET
integrated database retrieval system
