Anopheles merus: 121589853
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Entry
121589853 CDS
T08889
Name
(RefSeq) helicase SKI2W
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
amer
Anopheles merus
Pathway
amer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121589853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amer03019
]
121589853
Enzymes [BR:
amer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121589853
Messenger RNA biogenesis [BR:
amer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121589853
mRNA degradation factors
3'-5' decay
Ski complex
121589853
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
Ski2_N
ResIII
DEXQc_Suv3
Helicase_C
MTR4_beta-barrel
MTR4-like_stalk
Ski2_beta-barrel
ATPase_2
Spectrin_Anc-1
LIF1_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
121589853
NCBI-ProteinID:
XP_041764989
UniProt:
A0A182VDZ3
LinkDB
All DBs
Position
2R:complement(28402285..28406526)
Genome browser
AA seq
1223 aa
AA seq
DB search
MSFDPTWLKEPPPIVEDTEDLLRAFILEPKIPLHEPKPYFEPRHPSFDQLYDIPHAPIST
RIVPDRCPETGKVLDFIETQVQNAGSTAKNSMSLQREPTESIDSARGSASYFPFWPGGFD
EPESVLAGLVPSPLFETDLKSCPPGFATGVEFEAPPTGMDGARATEDSGKSGMVDLLSAI
ASEEAFVELLPEGLQTKLSTNDQSTQGTQQEALPAGIDEEEGLLAVTGEQEAGEQVLKIS
TVTNNALQSAEWAEMLDISKPVDDFYVKIPSMAHRFPFELDIFQKQAILKLEEHSHVFVA
AHTSAGKTVVAEYAIALSKKHMTKTIYTSPIKALSNQKYRDFKTTFQDVGLITGDIQIDP
TASCLIMTTEILRSMLYCGSDITRDLEYVIFDEVHYITDSDRGHVWEEVLILLPDHVCIV
MLSATVPNTIEFANWVGKTKKKRVWVVSTAKRPVPLEHYLYTGFGGKSKDDSFLIVNAQS
QFVQEGYRRAKESYEAKQAKSTGRRNNGPYSQRQEQTLWVGLIDHLQKKEKLPVVAFTLS
RNRCDNNAEALMSCDLTTAREKYAITSFFQQCLQRLVPADRVLPQVQQIQSCLERGIGIH
HSGILPILKEIVEMLFARGLVKILFATETFAMGVNMPARTVIFDSTRKFDGQAFRPLQPS
EYTQMAGRAGRRGLDKTGTVIILCKQNLPLDGELKTMILGKPVRLESQFRLTYAMMLYLL
RVELVSVENMMLHSFREFDKRQQMPQSKLELNQVQEKMSALSKLSDHLQPLCEFYEAASE
YLNLRNELLPKQLCQPKAINELKVGRVVVVTDEHHYNKLGILLSVSVQSHKELKLVVLVL
DHCASGKTQPASPETLNRGPLWHQMLSLALPYQTFLPEGVGGHAVLTLAPVNLIELTKHT
IKCDANAIIRSWEYRLIPRFRDAPPSQSTIEAVAALAELNATVVQAGSVTGTLELVRFPR
DLTNLELSQQLQTAQGRLNRWLPYTGMADFEHEFAVVYDRKQLERKLDELKYQASYESLS
LYPDYCRKLQVLQELKYIDDMQQVAMKGRVACEMGQNELMITELVMRNILTDLQPAEIAA
LLSSLVFQAKSDVTPKLTETLQKAEAQFREVENDIRLVERQYGVTDVCKKEELNFGLTEV
VYEWARNKPFAEIMLLTDIKEGIIVRCIQQLNETLCNVKDAARIIGDPVLHSKMEEASNA
IKRDIVFAASLYTSSTPIVIGDV
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgatccgacctggttgaaggaaccgccgccgatcgtggaagacacggaagac
ttgctgcgggcgtttattctcgagccgaaaattcccctccacgagcccaaaccgtacttc
gaaccgcggcacccctccttcgaccagctgtacgacattccgcacgcaccgatcagcacc
cggattgtgccggaccgctgcccggagacgggaaaggtgctggactttatcgaaacgcag
gtgcagaatgcgggctcgacggccaaaaactctatgtcgctgcaacgcgaaccgaccgaa
tcgatcgattcggcccgcggttccgcctcgtactttcccttctggccgggagggttcgac
gaaccggaaagcgtgttggccggcctagtacccagcccgctgttcgagacggatttgaaa
tcgtgcccgcccgggttcgctactggggttgagtttgaggcaccgcccaccgggatggac
ggtgcgcgcgcgacggaagacagcgggaagagcggtatggtcgatctgctgtccgcgatt
gccagcgaggaagcgttcgtcgagctgctgccggaagggctgcaaacgaaactgtccacc
aacgaccagtcaacgcagggcacacagcaagaagctctgccggcgggtatcgacgaggag
gagggtctgctggcggtgaccggtgagcaggaggccggcgaacaggtgctgaaaatttcc
accgtcaccaacaacgcgctccagagcgccgagtgggccgagatgctggacatttcgaaa
ccggtggacgatttctacgtgaaaatcccctccatggctcaccggttcccgttcgagctg
gacatcttccagaagcaggccatcctgaaactggaggagcacagccacgtgttcgtggcg
gcgcacacgtccgccggcaagacggtcgtggcggagtacgcgatcgccctgtcgaaaaag
cacatgaccaaaacgatctacacgtccccgatcaaggcactgtcgaaccagaagtatcgc
gacttcaagaccaccttccaggacgtcgggctgatcaccggggacatacagatcgatccg
accgcgtcctgcctcatcatgacgaccgagatcctgcgctcgatgctgtactgcggcagc
gacattacgcgcgacctcgagtacgtcatcttcgacgaggtgcactacatcaccgactcc
gaccgggggcacgtgtgggaggaggtgctgatcctgctgcccgaccacgtctgcatcgtg
atgctgagcgccaccgtgccgaacacgatcgagttcgccaactgggtgggcaagacgaag
aagaagcgcgtgtgggtcgtcagcacggccaagcggccggtcccgctcgagcactacctg
tacaccgggtttggcggcaagtcgaaggacgactccttcctgatcgtgaacgcgcagagc
cagttcgtgcaggaggggtaccggcgggcgaaggaaagctacgaggcgaagcaggcgaaa
agcacgggccgccgcaacaacggcccctacagccagcggcaggagcaaaccctgtgggtc
gggctgatcgatcatctgcagaagaaggagaagctgccggtggttgcgttcacgctgtcg
cgcaaccggtgcgacaacaacgcggaagcgctcatgtcgtgcgatctgacgacggcgcgc
gaaaagtacgccatcacgtcgttcttccagcagtgcctgcagcggctggtgccggccgat
cgtgtgctgccgcaggtgcagcagatccagagctgcctcgagcggggcatcggcatccat
cacagcggcatcctgcccatcctgaaggagatcgtggagatgctgtttgcccgcggactc
gtgaagatactgttcgcgacggagacgtttgcgatgggcgttaacatgcccgcgcgcacg
gtcatctttgacagtacgcgcaagttcgatgggcaggcgttccggccgctgcaaccgtcc
gagtacacgcagatggcgggccgggccgggcggcgcggtctcgacaagaccggcacggtc
atcatcctgtgcaagcagaacctgccgctcgatggcgagctgaagacgatgatactcggc
aagccggtccggctggagtcgcagttccggctgacgtacgcgatgatgctgtacctgttg
cgggtggagctggtgtcggttgagaacatgatgctgcacagcttccgggagttcgacaag
cgccagcagatgccccagagcaagctggagctgaaccaggtgcaggagaagatgtccgcg
ctgagcaagctgagtgatcatctgcagccgctgtgcgagttttacgaagcggccagcgag
taccttaaccttcgaaatgagctgctccccaagcaactgtgccaaccgaaggcaatcaat
gagcttaaggtaggccgcgttgtcgtggtaacggacgagcaccactacaacaagctcggc
atactgctctccgtctcggtgcagtcgcacaaagagctgaagctggtcgtgctggtgctg
gatcattgcgcgagtggcaaaacccagccggcatcgccggaaacgctcaaccggggaccg
ctctggcatcaaatgctgtcgctcgcactgccctaccaaaccttcctgcccgagggtgtc
ggtggccacgccgtgcttaccctcgctccggtgaatctgatcgagctgaccaagcacacg
atcaagtgcgacgcgaacgccatcatccgcagctgggagtatcggctcataccgcggttc
cgcgatgcgcccccgtcccagtcgacgattgaggccgtcgctgcgctggccgaactgaat
gcgacggtggtgcaggccgggtccgtcactggcacgctcgagctggttcggttcccgcgc
gatctaaccaatctcgagctatcgcaacagctgcagacagcccagggccggctgaaccgt
tggctgccgtacacgggcatggccgactttgagcacgagtttgctgtggtgtacgatcgc
aagcagctcgagcggaagctggacgagctcaagtaccaggcgtcgtacgaaagtctctcg
ctgtacccggactactgccggaagctgcaggtgctgcaggagctcaagtacatcgacgat
atgcagcaagtggccatgaagggccgtgtcgcttgcgagatgggccagaacgagctgatg
ataacggagctggtgatgcgcaacatactgaccgatctgcagccggccgaaatcgctgcc
ctgctctccagcctggtgtttcaggcgaaatcggacgtcactcccaagctgaccgagacg
ctccaaaaggccgaggcacagtttcgcgaggtggaaaacgacatccggctggtggagcgc
cagtacggcgtgactgatgtgtgcaaaaaggaggagctcaactttggcctgaccgaggtg
gtgtacgagtgggcgcgcaacaaaccgttcgccgaaattatgctgctgaccgacatcaag
gagggcattatcgtgcgctgcatccagcagctgaacgagacgctgtgcaatgtgaaggac
gcggcgcgcatcatcggcgatccggtgctgcacagcaagatggaggaagcgtcgaacgcg
atcaagcgcgacatcgtgtttgcggccagtctgtacacctccagcacaccgatcgtgatt
ggggatgtgtaa
DBGET
integrated database retrieval system
