Anopheles merus: 121595585
Help
Entry
121595585 CDS
T08889
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
amer
Anopheles merus
Pathway
amer04382
Cornified envelope formation
amer04512
ECM-receptor interaction
amer04518
Integrin signaling
amer04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121595585
04518 Integrin signaling
121595585
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121595585
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121595585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amer04147
]
121595585
00536 Glycosaminoglycan binding proteins [BR:
amer00536
]
121595585
Exosome [BR:
amer04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121595585
Glycosaminoglycan binding proteins [BR:
amer00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121595585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121595585
NCBI-ProteinID:
XP_041775589
UniProt:
A0A182V7E0
LinkDB
All DBs
Position
3R:complement(28414532..28426614)
Genome browser
AA seq
1778 aa
AA seq
DB search
MGTRIKWLVTTSLVVWFGQQTYAQFWASSNNNDNSGVGLFKRQEQEYPRQLAPQIDPSYS
IMDTASGPQGPPGKNCTSGGCCLPKCFAEKGNRGLPGPMGLKGAKGVRGFPGSEGLPGEK
GTKGEPGPVGLQGPKGDRGRDGLPGYPGIPGTNGVPGVPGAPGLAGRDGCNGTDGLPGLS
GLPGNPGPRGYAGIPGTKGEKGEPARHPENYNKGQKGEPGNDGLEGLPGPQGEVGPRGFP
GRPGEKGVPGTPGVRGERGDKGVCIKGEKGQKGAKGEEVYGATGTTTTTGPKGEKGDRGE
PGEPGRSGEKGQAGDRGQVGERGHKGEKGLPGQPGPRGRDGNFGPVGLPGQKGDRGSEGL
HGLKGQSGPKGEPGRDGIPGQPGIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDG
FDGEKGERGQMGPKGGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGPEG
LRGEPGQPGYGIPGQKGNAGMAGFPGLKGQKGERGFKGVMGTPGDAKEGRPGAPGLPGRD
GEKGEPGRPGLPGAKGERGLKGELGGRCTDCRPGMKGDKGERGYAGEPGRPGASGVPGER
GYPGMPGEDGTPGLRGEPGPKGEPGLLGPPGPSGEPGRDAEIPMDQLKPIKGDKGEAGEK
GLMGIKGEKGFPGPVGPEGKMGLRGMKGDKGRPGEAGIDGAPGAPGKDGLPGRHGQTIKG
EPGLKGNVGYSGDKGDKGYSGLKGEPGRCASIPPNLEEAIRGPPGTQGEKGAPGIQGIRG
DKGEMGEQGRTGMQGIAGPPGAPGPVGPRGLTGLRGEKGNTGPLGPPGAPGRDGMPGAPG
LPGSKGGKGDPGLSMVGPPGPKGNPGLRGPKGDRGGMGDRGDPGQPGSVGYPGEKGDLGI
PGQPGFPGEVGPKGEPGPKGPAGHPGAPGRPGMDGVKGLAGLKGDVGAPGVIGLPGQKGE
MGQAGNDGLKGFQGRKGMMGAPGIQGVRGPQGAKGEPGEKGDRGEIGMKGLMGQTGPPGM
LGPKGDKGLAGLPGPACLPGLSGEKGDKGYTGPEGPPGEPGAASEKGQKGEPGVPGLRGN
DGLPGLEGPSGPKGDAGVPGYGRPGPQGEKGDVGLTGINGLPGLNGVKGDMGVPGFPGVK
GDKGTTGLPGVPGAPCMDGLPGAEGPAGPRGYDGEKGFKGEPGRIGERGELGEKGDQGLM
GPVGLMGRKGDRGVPGSPGLPATAAAIKGDKGEPGFPGAIGRPGKVGAPGLPGDMGTKGE
MGIQGLPGLPGPAGLNGLPGMKGDMGPMGEKGDSCPVVKGEKGLPGRPGKMGRDGPPGLL
GEKGDKGLSGLPGPMGPPGPPGPLGRQGEKGDRGDSGLMGRPGKDGLPGPQGQRGLPGPQ
GEKGDQGPPGFIGPKGERGERGRDGMNGLNGPQGLKGDRGMPGLEGVAGLPGMVGEKGDR
GLPGMAGLNGAPGEKGQKGETPQLPPQRKGPPGPPGFNGPKGDKGMPGLAGPAGIPGAPG
APGEMGLRGFEGARGLQGLRGDVGPEGRPGRDGAPGLPGPKGEPGRDCESAPYYTGILLV
RHSQSDEVPMCEPGHLKLWDGYSLLYVDGNDYPHNQDLGSAGSCVRKFSTLPVLACGQNN
ICNYASRNDRTFWLSTSAPIPMMPVTENEMRPYISRCTVCEAPTNVIAVHSQTLHIPECP
NGWDGLWIGYSFLMHTAVGHGGGGQSLSGPGSCLEDFRATPFIECNGGKGHCHYYETQTS
FWLVSLEDHQQFQRPEQQTLKAGNLLSRVSRCQVCIRR
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atggggacccgaataaaatggttagtcactacctcgctggtagtttggttcggacaacag
acgtacgcgcaattctgggcgtccagcaacaacaatgacaactccggcgtcggactgttt
aagcgacaggagcaggaatatccacgacagctagcgccacagatcgacccgagctacagc
ataatggacacggccagcggaccacagggaccaccgggcaagaactgcacctccggcggg
tgctgcttgccgaaatgtttcgccgaaaagggcaaccgcggcctgcccggaccgatgggg
ctgaagggtgcgaagggtgtgcgcgggttccccgggtcggagggtttgccgggcgagaag
ggcaccaagggcgagccgggcccggtcgggctgcagggcccgaagggcgatcggggccgg
gacggtttgcccggctacccgggcatccccggcacgaacggtgtgccgggtgtgccggga
gcacccggtctggccggtcgggacggttgcaacggtacggacggtctgcccggtttgtcc
gggctgccgggaaatccgggcccccgcggttacgccggcatccccggcacgaagggcgag
aagggcgaaccggcgcggcatccggagaactacaacaagggccagaagggtgagccgggc
aacgatggactggaaggactgccggggccgcagggcgaggtaggaccgcgcggtttcccc
ggccgacccggcgaaaagggtgtccccggtacgcccggtgtgcggggcgagcggggcgac
aaaggcgtgtgcatcaagggcgagaagggccagaagggcgcgaagggcgaagaggtgtac
ggcgccacgggcacgacgacgacgaccggaccgaagggcgagaagggcgaccgcggtgag
ccgggcgaaccgggccgatccggcgagaagggacaggccggcgaccgggggcaggtgggc
gagcgaggccacaagggcgagaagggtttgcctggacagccgggcccgcgagggcgcgac
ggtaactttggaccggtgggcctgcccggccagaagggtgaccgcggctcggaaggactg
cacggactgaagggccagagcggaccgaagggtgagccgggacgggacggcattccgggc
cagcccggtattgctgggccggccggggcgcccggcggcggcgaaggacgacccggggcg
cccggtccgaagggaccgcgcggctacgaaggaccgcagggcccgaagggcatggacgga
ttcgacggagaaaagggcgagcggggacagatgggcccgaagggtggccagggtgttcct
ggccggcccggtcccgaaggtatgccgggcgacaagggcgacaaaggcgagtcgggatcg
gtcggtatgccggggccgcagggaccgcgcggctaccctggccagcccggacccgagggt
ctgcgcggtgagccgggtcaaccgggctatggcattcccggacagaagggtaatgccggt
atggctggattcccgggactgaagggacagaaaggcgagcgtggcttcaagggtgtgatg
ggtacgcccggcgacgcaaaggaaggacgcccgggagcaccaggactaccaggacgtgat
ggcgaaaagggcgaaccaggtcgtccgggactccccggagcgaagggcgagcgcggtctt
aagggagagctcggtggacgctgtacggactgccggcccggaatgaagggcgacaaaggc
gaacgaggctatgccggcgaaccaggccgcccgggagcgagcggtgtgccgggcgaacga
ggataccccggtatgccgggcgaggacggaacaccgggactgcgcggtgagccaggccct
aagggagagccgggcctgctcggtcccccgggtccatcgggagagccgggtcgcgatgcc
gaaataccaatggaccagctgaaacccatcaagggcgacaagggcgaagcgggcgaaaag
ggcctgatgggcatcaagggcgagaaaggattccccggaccggtcggaccggagggcaag
atgggactgcgcggcatgaagggcgacaagggacgaccgggcgaagcgggcattgacgga
gcgcccggcgcgccgggcaaggacggtctacccggccggcacggacaaacgatcaagggt
gaaccggggctgaagggtaacgtaggctactcgggagacaagggcgacaagggttactcc
gggctgaagggtgagcctggccggtgcgccagcattccgccaaacctcgaggaagcgatc
cgtggaccgccaggcacgcagggcgagaagggcgcccccggcattcagggcattcgcggc
gacaagggcgaaatgggcgaacagggacggacgggcatgcagggtattgccgggccgccg
ggagcacccgggccggtaggaccgcgcggactgacgggactgcggggcgaaaagggtaat
acgggaccgctgggaccgccgggagcacctggccgtgacggtatgcccggagcaccggga
ctgcccggctcgaagggtggcaagggtgatccgggcctgtcgatggtgggtccgccgggg
ccgaagggtaacccgggactgcgaggaccgaagggcgatcggggcggcatgggtgatcgg
ggcgatccgggacaacccggctccgtgggctatccgggcgaaaagggcgatttgggcatt
ccgggacagcctggcttcccgggcgaagtgggaccgaagggtgagccagggccgaaggga
ccggcgggacacccgggcgcaccgggccgtcccggtatggacggtgtgaagggtttggcc
ggtctgaagggtgacgttggtgcaccgggcgtgatcggcctacccggccagaagggcgaa
atgggccaggcgggtaacgacgggctgaagggcttccagggccgcaagggtatgatggga
gcgccgggcattcagggcgtacggggtccgcagggcgcgaagggcgaaccgggcgaaaag
ggcgaccggggcgaaatcggcatgaagggactgatgggacagacgggccctcccggtatg
ctcggaccgaagggagacaagggtctggccgggctgccgggaccggcctgtctgcccgga
ttgtcgggcgaaaagggcgacaaaggatacaccggaccggagggaccgccgggcgaaccg
ggtgccgcgtcggagaagggccagaaaggagagccgggcgtaccgggactgcgcggcaac
gacggactgcctgggctggagggaccgtccggaccgaagggtgatgcgggcgtgcccggc
tacggtcgacctgggccgcagggcgaaaagggtgacgttggcctgacgggcatcaatggg
ctgccgggcttgaacggggtgaagggtgacatgggcgtccctggattcccgggcgtgaag
ggcgacaagggtacgaccggattgccaggtgtgcctggtgcaccgtgcatggacggactg
cccggagcggaaggtcccgctggtccgcgcgggtacgacggcgagaagggcttcaagggc
gaaccaggccgcatcggcgagcgcggcgaactgggcgaaaagggtgaccagggactaatg
ggaccggtggggctgatggggcgcaagggcgaccgtggtgtgccgggttcgcccggtctg
ccagctacggcggccgccatcaagggcgacaagggtgagccgggcttcccgggtgcgatc
gggcgtccgggcaaggtcggtgcgccgggcctgccgggcgacatgggcaccaagggcgag
atgggcatccaggggctgcccggactgcccggaccggccggactgaacgggctgccgggc
atgaagggcgacatgggaccgatgggcgaaaagggcgactcctgcccggtggtgaagggc
gaaaagggtctgccgggccggccgggcaagatgggccgcgacggtccgcccggcctgctg
ggcgaaaagggtgacaaaggattgtccggcctgcccggaccgatgggaccccccggaccg
cccggcccgcttggccggcagggcgaaaagggtgaccgcggcgattccggtttgatgggc
cgccccggcaaggacggactgcccggaccgcagggccagcgagggctgccgggtccgcag
ggcgaaaagggcgaccaggggccgccagggtttatcgggccgaagggcgagcggggcgaa
cggggccgggacggaatgaacgggctgaacgggccgcaaggactgaagggtgatcggggc
atgccgggattggagggcgtggccggtctgcccggtatggtgggcgagaagggtgaccgc
ggtctgcccggtatggctggcctgaacggtgcgccgggcgagaagggccagaagggtgag
acgccacagctgcccccgcagcgcaagggacccccaggaccgcccggattcaacggaccg
aagggtgacaagggcatgccagggttggccggaccggccggcattccgggcgctcccggt
gcaccgggcgagatgggactgcgcggattcgagggcgcgcgcggcctgcagggactgcgc
ggtgacgttggacccgagggacggcccggacgcgacggcgcgccgggtctgcccgggccg
aagggtgagccgggccgggactgcgagtcggcaccgtactacaccggcatcctgctggtg
cggcacagccagtcggacgaggtgccgatgtgcgagccgggccatctgaagctgtgggac
ggctactcgctgctgtacgtcgacggcaatgactatccgcacaaccaggacctcggttcg
gccggttcctgcgtgcgcaagttctccacgctgcccgtgttggcctgcggacagaacaac
atctgcaactacgcgtcccgcaacgatcggacattctggctgtcgacgtccgcgccgatt
ccgatgatgccggtaacggagaacgagatgcgcccgtacatctcgcggtgcacggtctgt
gaggcaccgaccaacgtgatcgcggtgcacagccagacgctccatattccggaatgtccg
aacggatgggacggcctatggattggctacagtttcctaatgcacactgccgtcggccac
ggtggcggtggccagtcactgtccgggccgggctcgtgcctggaggacttccgtgccaca
ccgttcattgagtgtaacggtggcaagggccactgccattactacgaaacgcaaacctcc
ttctggctggtttcgctcgaggaccaccagcagttccagcggccggagcagcaaacgctc
aaggccggcaatctgctaagccgagtatctcggtgccaggtgtgcatccgccgttga
DBGET
integrated database retrieval system