Anopheles merus: 121595832
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Entry
121595832 CDS
T08889
Name
(RefSeq) collagen alpha-1(III) chain
KO
K06237
collagen type IV alpha
Organism
amer
Anopheles merus
Pathway
amer04512
ECM-receptor interaction
amer04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121595832
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121595832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amer04147
]
121595832
00536 Glycosaminoglycan binding proteins [BR:
amer00536
]
121595832
Exosome [BR:
amer04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121595832
Glycosaminoglycan binding proteins [BR:
amer00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121595832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121595832
NCBI-ProteinID:
XP_041776034
LinkDB
All DBs
Position
3R:28426821..28456503
Genome browser
AA seq
1813 aa
AA seq
DB search
MLWPADPTLTGGLERKDIVQRRRRSSAGSVTRGVALFITSVLLIIQPSTAAVCNQTVCDC
KGVQGPPGQIGPHGVPGQFGDPGDIGYDGPPGLRGDRGNRGEMGTSGPKGYRGDTGERGP
LGAPGYAGLPGEPGYRGPYGIDGCNGTDGAMGTPGYPGPPGERGPQGPPGVPGPRGTSGE
GGINSKGTKGDRGVAGVPGVMGQQGWQGGRGADGFDGTTGETGDAGLDGPKGEQGEPSED
FCPGEPGDPGEPYYYLVGKNETVNIGMKGPKGDRGYDGMAGLQGMKGDSGMQGDRGQKGF
KGEEGKLGDRGKQGKEGPPGAPGDKGEKGAPGYAGLDGMPGDKGPSGDDGRPGLPGVQGP
PGPKGEYRPELAPIVIGPQGPQGDMGPPGRPGNVGIPGNKGLRGPMGPPGPPGDPGLNGR
PGPKGISPPGQRGDDGEGGPPGPLGIRGIPGLAGAKGQVGFPGRNLQGAKGEPGTNGLNG
DFGEKGDQGDDGEPGDKGLPGIGVNVTGPPGPAGLPGRAGPPGDWGFNGYNGPKGDKGLR
GDDCGTCPPGPKGVKGEDGDIGRPGLDGYDGNRGLPGPRGFQGPAGKQGLKGLLGRKGER
GDLGERGVPGEPGRPGVLRRAKNFIDLTPEMGDRGDRGQRGDQGVPGDLGDFGAVGYPGR
PGEQGEYGDDGDSGRPGLDGLPGMDGRNGAPGRDAFVNEYNIWSIRGTPGVPGDKGAKGE
RGDQGDRGEPGAMSEMTYSIAGPKGLTGVPGDVGPKGEKGYKGEMGLHGVRGQDGPAGLP
GVSRQGPEGYKGYYGVIGDHGPAGMPGEDGRPGPDGLPGLQGLRGQRGDPGRPILMGEKG
VEGEGGFYGEIGDKGFKGPEGIRGTTGMPGVKGERGDPGPLGKPGLRGNKGQMGDIIYGD
RGAPGLPGRDGLQAPYGDKGERGEPGMEGFPGPKGERGEIGRDGLPGLPGDDGLPGERGL
QGRMGDMGEEGYQGERGPTGDPGYPGLTGARGLAGLRGLAGPTGDPGDMGFPGRDGAPGR
KGERGDFGDAGPRGRKGSASFSGMKGENGEPGMMGPPGYNARPGQMGRKGEEGDAGQVID
GYPGVKGQKGAPGFPGIPGRPGAKGERGDVGVFGPKGISGDKGRDGYPGIAGRPGRPGPR
GPLGPRGEQGSRGETGEPGEDGLRGYAGEKGLRGDVGPVGPTGLTGMVGDPGLPGIPGNV
MMRSAQQGDRGDPAPEGPEGDEGPPGLKGQRGYPGRKGEQGLPGFVGMVGIEGHDGPKGQ
RGDPGMKGQPGELETRPERGDQGDAGYDGLTGRPGLPGNKGAPGDYGDNGPMGLAGMPGF
VNGALKGMRGDTGYEGAPGLDGLPGLPGLDGMMGPAGPRGMPGSIGAIMPGFRGDPGEDG
LPGLDGMVGPPGFPGDRGLTGLPGLRGLPGPKGLQGEVGLEGYHGMVGLKGMKGEVGDLP
NLSNWRPTQPGDRGTPGLRGEPGDEGDMGPPGYPGSRGPKGMQGLQGEQGATGEVGFKGE
QGIAGAPGRSGIEGLPGLPGLPGEPAAPPPPPKNLGYLFARHSQKVTIPECPINTYKLWD
GYSLVNVIASSRSVGQDLGAAGSCLRRFSTMPFMFCDINNVCNYASNNDDTIWLATPEPM
PMSMAPIPADQVERYISRCSVCESNTRVMALHSQSMSIPDCPEGWEELWLGYSYAMHTSD
NSGGFGQDFVSPGSCMEEFRPQPVIECHGHGTCNFYDGISSFWLTIIDDAMQFNRPQPQT
LKAHQTSKVSRCIVCRRKAGIMRTLHGGSTITASALRRANTSTVYPPPPPQPAPGSRRRV
SPGRQRNRNRYQG
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggcccgcggaccccacgctcacggggggtctggaacgtaaggacatcgtccaa
cggaggcgccgaagctctgcagggtcggtgacgcgcggtgtggcgcttttcatcacttcg
gtgcttctgataatacagccatcaacggcagcggtctgcaaccagacggtatgtgactgt
aaaggagtgcagggaccgccgggacagattggaccgcacggtgtaccagggcagtttggc
gatccgggcgatattgggtacgatggaccgccaggactgcgcggcgatcgtggtaatcga
ggcgaaatgggcacgagtggaccgaaaggatatcgtggtgacactggcgagcgaggaccg
ctgggagccccgggctatgcgggacttccgggcgaacccggctaccgcggcccgtacggt
atcgacggttgcaacggcacggacggtgcgatgggaacgcccggctacccgggaccgccg
ggcgagcgtggcccccaaggtcctccaggtgtgcccgggccgcgtggtacctccggcgaa
ggcggtatcaactccaagggcaccaagggcgatcggggcgtggccggcgttcccggtgtg
atgggccagcagggctggcagggtggtcgcggtgcggacgggttcgatgggacgaccggt
gagacgggcgatgccggactggatggcccgaagggcgagcagggcgaaccgagcgaagac
ttctgcccgggcgaaccgggcgatccgggcgaaccgtactactacctggtcggcaaaaac
gaaacggtcaacattggcatgaagggcccgaagggtgaccggggctacgatggaatggcc
ggactgcagggcatgaagggcgactcgggcatgcagggcgaccggggccagaaaggcttc
aagggcgaggaaggcaagctcggcgatcggggcaagcagggcaaggagggaccaccgggc
gcaccgggcgataagggcgagaagggtgcgcccgggtacgccggactggacggtatgccg
ggcgacaagggcccctccggagacgatggacggccggggctgccgggtgtgcagggaccg
ccgggaccgaagggcgaataccgtcccgagctggcaccgattgtgattggaccgcaggga
ccgcaaggtgacatgggaccaccgggacgaccgggcaacgttggcatccccggcaacaag
ggtttgcgcggccccatgggtccaccgggtccgcccggcgatccgggtctgaatggacgg
cccggcccgaaaggcatctcgccgccaggccagcgcggtgacgacggcgagggaggaccc
ccgggaccgctcggcatccggggcataccggggctggcgggcgctaagggacaggtcggc
ttcccggggcgcaatctgcagggcgccaagggcgaacccggcacgaacggactgaacggt
gactttggcgagaagggcgaccagggcgacgatggcgaaccgggcgacaagggtctgccc
ggcatcggtgtgaacgtgacggggccgcccggaccggccggactgcctggcagggcggga
ccgcccggcgactggggcttcaacggatacaatggcccgaaaggtgacaaaggcttgcgc
ggcgacgactgtggcacatgcccgcccggaccaaagggcgtcaagggcgaggacggtgat
atcgggcggccgggattggacggatacgacggaaatcgagggctaccggggccgcgcggc
ttccagggtccggccggaaagcaaggcttgaagggactgttgggccgtaaaggcgaacgg
ggcgacttaggcgaacgtggtgtaccgggcgaaccgggacgacccggtgtgttgcggcgg
gcgaaaaacttcatcgatctgacgccagaaatgggcgatcgaggcgatagaggacagcgc
ggtgatcaaggtgttccgggcgatttgggcgactttggagctgttggatatccgggacgg
ccgggcgaacagggcgaatacggtgacgacggtgactctggccggccgggtctggacggg
ttgccgggcatggacggtcgcaacggtgcgcccggtcgggatgcgttcgtcaacgagtac
aacatctggtctattcgcggcacacctggtgtaccgggcgacaaaggtgccaaaggagag
cgcggtgaccagggagatcggggcgaaccgggcgccatgtcggagatgacgtacagcatc
gcgggcccgaagggcttgacgggagtgcccggcgacgtcggccccaagggcgaaaagggc
tacaagggcgaaatgggactgcacggagtgcgcggtcaggatggaccggccggactgccc
ggagttagccgtcagggaccggaaggctacaagggctactacggcgtgatcggtgaccac
gggccggccggcatgccgggcgaagatggccgtcccggaccggacgggctgcccgggctg
caggggctgcgcggtcagcgcggtgacccgggccgaccgatactgatgggcgaaaagggc
gtggaaggcgagggcggcttctacggcgaaatcggcgacaagggcttcaagggcccggaa
ggtatccgcggcacgaccggaatgccgggagtgaagggcgagcggggcgatccgggcccg
ctcggcaagccgggcctgcgcggcaacaagggccagatgggtgacatcatttacggcgat
cgtggagcgccgggcctgccgggccgcgacggtctgcaggcaccgtacggagacaagggc
gaacggggcgaaccgggcatggaaggtttccccggtcccaagggcgagcggggcgaaatc
ggacgcgacggactgcccggactgccaggcgacgatggactcccgggcgagcgtggcctg
cagggacgcatgggcgatatgggcgaggaaggctaccagggcgaacggggaccgacgggg
gatccaggctatcccggtctgactggcgcccgcggactggcgggactgcgcgggctggct
ggcccgaccggcgacccgggcgacatgggcttcccggggcgcgatggagcaccgggccgg
aagggcgagcgcggcgactttggcgatgcgggaccgcgcggacgcaagggcagcgcctcg
ttcagcggcatgaagggcgaaaacggcgagccgggcatgatgggcccgcccgggtacaac
gcacgccctggccagatgggtcgcaagggcgaggagggagacgccggccaggtcatcgac
ggatatccgggagtgaagggacagaagggcgccccgggcttccccggcatcccgggccga
ccgggtgcgaagggtgagcggggagatgtcggcgtgttcggcccgaagggtatctccggc
gacaagggacgcgatggctatccgggtattgccggacgcccgggacggcccggaccgcgt
ggaccgttgggcccgcgaggagagcaaggatcgcggggcgaaacgggcgaaccgggcgag
gacggactgcgaggctacgccggcgaaaagggactgcgcggtgacgtcggtccggtcgga
ccgaccgggttgactggaatggtgggcgacccgggtctgcccggcatccccggcaacgta
atgatgcgctcggcccagcaaggcgaccggggtgaccccgcccccgagggtccggaagga
gacgagggaccgccgggactgaagggccagcgaggctatccgggccgcaagggcgaacag
ggactgcccggattcgtcggcatggtcggtatcgagggacacgatggaccgaagggacaa
cgcggcgaccccggcatgaagggacagccgggcgagctggaaacacgccccgagcgcggc
gaccagggcgacgctggctacgatggactgactggacggcccggcctgcccggcaacaag
ggagcgcccggcgactacggcgacaacgggccgatgggactggccggcatgccaggcttc
gtgaacggtgcgctgaagggcatgaggggcgataccggctacgagggagcacccgggctg
gacggactgcccggcctgcccggcctggacggcatgatgggtccggccggaccgcgcggc
atgcccggcagcatcggcgccatcatgcccggcttccggggcgatccgggcgaggacggg
ctgccggggctagacggaatggtcggcccgcccggcttcccgggcgatcggggactgacg
gggctgccgggactgcgcggactgcccgggccgaagggtctgcagggcgaggtcggactt
gaaggctaccacggcatggtgggcctgaagggcatgaagggcgaggtgggcgatctgccc
aacctatccaactggcggccgacgcaaccgggcgaccggggcacgccaggtctgcgcggc
gagcccggtgacgaaggtgacatgggcccgccgggctacccgggcagccggggccccaag
ggcatgcagggactgcagggcgagcagggcgctacgggcgaggtcggcttcaagggcgag
cagggcattgccggtgcccccggacggagcggtatcgagggactgccggggctgccgggg
ctgcctggcgagccggcggcaccgccgccaccgcccaaaaacttgggctacctgttcgcg
cgccactcgcagaaggtgaccatcccggagtgcccgatcaacacgtacaagctgtgggac
gggtactcgctcgtgaacgtcatcgctagcagccggtcggtggggcaggatctcggtgcg
gccggatcgtgcctacggcgcttcagcaccatgccgttcatgttctgtgatattaacaac
gtctgcaactacgcctcgaacaacgacgacacgatctggctggcgacgcccgaaccgatg
ccgatgtcgatggcaccgatcccggccgaccaggtcgagcggtacatctcgcgctgcagc
gtgtgcgagtcgaacacgcgcgtcatggcgctgcacagccagtcgatgagcataccggac
tgcccggaaggttgggaggagctgtggcttggctacagttatgcaatgcacacgtcggac
aactcgggcggcttcggtcaggactttgtgtcgcccggctcgtgcatggaagagttccgg
ccgcagcccgtcatcgagtgccacgggcacggtacgtgcaacttctacgacggtatctcc
tccttctggctgacgatcattgacgatgcgatgcagttcaaccggccccagccgcaaacg
ctgaaggcacaccaaaccagcaaagtgagccgctgcatcgtttgccgtcgcaaggcaggc
atcatgcggacactgcacgggggcagcacgataacggcgtcggcccttcgcagagcgaat
acgtctacggtgtacccgccaccgccaccacagccggcaccaggctccagaagacgggtg
tccccgggtcggcagcgtaaccgcaaccgctaccagggctag
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