Anopheles merus: 121595978
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Entry
121595978 CDS
T08889
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
amer
Anopheles merus
Pathway
amer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121595978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amer03019
]
121595978
Messenger RNA biogenesis [BR:
amer03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121595978
mRNA degradation factors
5'-3' decay
Decapping complex
121595978
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
TFIIA
Motif
Other DBs
NCBI-GeneID:
121595978
NCBI-ProteinID:
XP_041776422
LinkDB
All DBs
Position
3R
Genome browser
AA seq
1038 aa
AA seq
DB search
MDSFFGFDTSLPGENDEEEEEEEARRFFQAAPRRTAELHSPLQRRRCKEDISDEEEYDAL
NDETFGAADKGDWEDIHEHLVRLESGRNGGRTGSFLGEDEDDGGSSSVDLLFDDYELDLQ
LSKLNLFYSNNNHGNSNNNNSESGRSSVVAQSIGDEFASKLRLDPSIWGSPAKVPAPVQP
PYSEYRPSGTPFSALPPQQSAFRPPEPAHPIGGGGLPPKPPPSLPPGLFPPMKMLSVEDI
ERTIIQHQHQQNQHQSMLQKQMSQQQQQQQQQQHQHQLHYHHNQFHQQQQQQTLQPFRTP
APVPAQPPPPVKAREHFTPAKEVKSMQPPIPMISSPVAAPPLRVPPALLTPPPSLLGARN
AGPAALFPPGPSQPPPPAPPPPMLNNANRLPLGLLPYNMLAARPYSTPINNLAMHPAFPQ
RCSYGSPLQGFLGGPGPVQMGPPPPLPPRHPGPAPGGPPPFLMQRSPTPLPTNQFNQRLV
QEIQQNHPLLAFNRQLAAASTLSVCGNGVNKAAPLVALPRAGFMKQQHHFQQQQQQQRSR
VGNGMPSSTAGGGQPEERDEYANMMSNRDKQWLIGIQLTQLNSDAPYFNDYYFTVYKQRL
AAAKGEGDNRIYRENQLNHPFTQPKEHAQLLLLSLLSKNGKSGLLGTNRERRSSESRSNP
NGGSEGKDGSAPAGGGRAYTPLQFQNSLGKLQCGSVIAPRKLIDADVMGSDQLNGNGVPA
IEPPPAAIQRKARHVLLLIETLYKLVLKLEDLGNPVAIEAMKALREKKMRERTSSTGSGS
GVACLPEAGAKIRSNDSSTIASLSSDSAPSEPLEPEESYDELAGSLVAQLSQDKITSILA
VRKGRILLRRSLAVLHEHPGRWMLWGMIFVALPSLPRKDRDDADGLLLTLFGEFERQLRY
GTIKELLLVAKTIGTAGKVMQCIVSSKFLLSCIITIIFQMEMFCGKNPSALLKASEDGWW
VSFLGDVNRIVKESVGPIRSSSITINPDNNIVRTLIVHFARFGTRVDGTELLNFITDNGN
GKPKSGRKQSLQEPGVAK
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggattcctttttcggcttcgataccagtctgccgggtgagaacgacgaggaggaggag
gaggaggaagctcgccgattcttccaggcagcaccgcggcgcaccgccgaactgcattcg
ccgctgcaacggcgccgatgcaaagaagatatctcggacgaggaagagtatgacgccctg
aatgacgaaacgttcggtgcggcggacaagggcgactgggaggacatccacgagcatctc
gtgcggctggaaagtggcaggaatggggggcgaaccggttccttccttggggaggatgag
gacgacggaggcagcagcagtgtcgatctgctgtttgacgactacgagctggatctgcag
ctttcgaagcttaatctcttctatagcaacaacaatcacggcaacagcaacaacaacaac
agcgagagcggccgtagcagtgtggtagcccaaagcattggcgatgagttcgcgagcaag
ctacggctggatccgagcatctggggcagcccggcgaaggtaccggctccggtgcaacca
ccgtacagcgagtataggcccagcggtacgccattttctgccctgccaccacagcagagc
gcctttcgaccaccggaaccggcgcatccgatcgggggaggtggcctgccgccaaaaccg
cctccctcactgccaccgggcttgtttccacccatgaagatgctgtcagtggaggacatt
gaacgaaccatcatccagcatcagcatcagcaaaatcagcatcaaagtatgctgcaaaag
caaatgtcacagcagcagcagcagcaacaacaacaacaacaccaacaccaactccattac
catcacaaccaatttcaccaacagcagcagcagcagacactgcaaccattccgcacaccg
gcaccggtcccggcccaaccaccaccaccagtgaaagctcgcgaacatttcacacccgcc
aaggaggtaaagagtatgcagccgccgatcccgatgatctcctcgccagtagcagcacca
ccgttacgggtaccaccggcgctgctcaccccgccgccctcgctgctgggcgcccgaaac
gctggtcccgctgccctgttcccacccggaccgtcgcagccaccaccgccggcacctccg
cctcccatgctgaacaacgcgaaccgtcttccgcttggtttgctgccgtacaacatgctt
gccgcccgaccgtactcgaccccgatcaacaacctggcgatgcatccggcattcccgcag
cgctgctcgtacggttccccgctgcaagggtttctgggtggccccggcccggtacagatg
ggtccgccaccgccgctacctccccgccatccgggaccagcgcctggcgggccaccgccc
tttttgatgcagcgcagcccgacgcccctgccgacgaaccagttcaaccagcggctggtg
caggaaattcaacaaaaccatccgctgctcgcatttaaccgacagctcgctgcggccagc
acgctcagcgtttgcggcaatggcgtgaacaaagcagccccgctagtagccctgccaagg
gcgggttttatgaagcagcagcaccattttcagcagcagcagcagcagcaacgatcccga
gtaggcaatggaatgccatcgagcactgcaggcggcgggcagccagaggagcgcgatgag
tacgcaaacatgatgagcaatcgcgacaagcagtggctaatcgggatacagctgacgcag
ctcaactcggacgcgccctactttaacgattactatttcaccgtgtacaagcagcggctg
gcagcggcgaagggcgagggcgataatcggatctatcgcgaaaatcagctcaaccatccg
ttcacccagccgaaggagcatgcgcagctgctgttactgtcgctgctgtcgaagaacggc
aagagcggactgctcggcacgaaccgcgaacgtcgcagttccgaatcccgctcgaacccg
aacggcggtagcgagggaaaggatggctcagcgccggctggtggtggtcgagcgtatacc
ccgctccagtttcaaaattcgctcggcaagctgcagtgcggtagtgtgatagcgccgcga
aagctcatcgacgccgatgtgatgggcagcgaccagctgaacggaaatggcgtgccggca
attgaaccgccgcccgccgctatccagcgcaaagctcgccatgtgctgctgctcatcgag
acgctgtacaagctggtgctcaagctggaagatctcggcaatcccgttgcgatcgaagcg
atgaaagcgctgcgcgaaaagaaaatgcgcgagcgaaccagcagcaccggcagcggcagc
ggtgtggcgtgtttgccagaagcgggcgccaagattcgctcaaacgacagttccacgatt
gcgtcgctatcgagcgattccgcgccaagtgagccgctcgagccggaagagtcgtacgac
gagctggccgggtcgctcgtagcgcagctttcgcaggacaaaatcacctccatactggcc
gtgcgcaaggggcgcatactgctgcgccgctcgttggccgtcctgcacgagcatccgggc
cggtggatgctgtggggcatgatcttcgtcgcgctgccctccctgccgcggaaggatcgg
gacgatgcggacgggctgctgctgacgctgttcggcgagttcgagcgccagctgcggtac
ggcacgatcaaggagctgctgctggtggcgaaaacgatcggcactgccggcaaggtgatg
cagtgcatcgtcagcagcaagttcctgctctcctgcatcatcacgatcatcttccagatg
gagatgttctgtggcaagaacccgtcagcgctgctgaaagcttccgaggatggctggtgg
gtatcgttcctcggggacgtgaaccgcattgtgaaggaaagcgtcggaccgatccgcagc
agcagcattacgatcaacccggacaacaacatcgtccgtacgctgatcgtgcactttgcg
cggttcggtacgcgggtcgatgggacggagctgctgaactttattaccgacaatgggaac
ggcaagcccaagtcgggtaggaaacagtcgctgcaagagccaggcgttgccaagtga
DBGET
integrated database retrieval system