Anopheles merus: 121600441
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Entry
121600441 CDS
T08889
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
amer
Anopheles merus
Pathway
amer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121600441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amer03019
]
121600441
03041 Spliceosome [BR:
amer03041
]
121600441
Messenger RNA biogenesis [BR:
amer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121600441
Spliceosome [BR:
amer03041
]
Complex B
Other components
Prp19-related factors
121600441
Complex C
121600441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
TPR_12
TPR_2
TPR_10
Mad3_BUB1_I
ARM_TT21_C
PPR
NRDE-2
ARM_TT21
Ribosomal_L27A
SNAP
Motif
Other DBs
NCBI-GeneID:
121600441
NCBI-ProteinID:
XP_041784965
UniProt:
A0A182VAQ8
LinkDB
All DBs
Position
3L:complement(39102776..39105646)
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AA seq
863 aa
AA seq
DB search
MPISSEVNLAEVFFNEEDLPYEEEILRNAYSVKHWMRYVEHKRNAPRFVINTVFERALKE
LPGSYKLWYNYLKTLRKQVKGKCITDGEYEEVNNAFERALVFMHKMPRIWMDYCAFMTAQ
CKITRTRQVFDRALRALPITQHHRIWPLYLDFLKRFDIPETAVRVWRRYLKLCPEDAEEY
VEFLQSIGHLDEAAQQLASIVDNEHFVSKHGKSNHQLWNELCELISKNPDKVHSLNVDGI
IRGGLRRYTDQLGHLWNSLAGYYVRSGLFDRARDIYEEAIQTVTTVRDFSQVFDAYAQFE
ELSLSKVMELLERNPNPTEDQEIDVELRMARFEYLMERRLLLLNSVLLRQNPHNVAEWHK
RVELYEGKPHEIINTYTEAVHTVQPKLAVGKLYTLWVAFAKFYETNKQLADARVVFEKAV
QVDYLKVDELASVWCEWAEMEIRQEQYEEALRIMQRATAMPKRKVAYHDDTETVQMRVYK
SLKLWSMYADLEESFGTFKTCKQVYDRIIDLKICTPQIIINYGMFLEEHNYFEEAFKAYE
KGIALFKWPNVYDIWNTYLTKFLSRYGGQKLERSRDLFEQCLDGCPPELAKNLYLLYAKL
EEQHGLARHAMAVYERATTAVKEEEMYAMFNLYIKKAAEIYGIPRTRQIYEKAIEVLPEA
DSRKMCVLFAEMETKLGEIDRARAIYAHCSQMCDPRVTADFWQTWKEFEIRHGNEDTMRE
MLRIKRSIQATYNTQINMMSAALINAAVTTGEPPKDAMRALEVKAAETTARAIAAVGATG
GNIMFVRGETQGGAAKEDRVVNPDEIDIDDDEEEDDDDDETAGDEDGEDIAKKIPIERQS
IPAKVFGSLRREVEEKEENDMAE
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgccgatctcatcggaagtgaatctggcggaagtgttcttcaacgaggaagacttgccg
tacgaggaggagatccttcgcaatgcctactcggtgaagcactggatgcggtacgtggag
cataagcgcaatgcgccccggttcgtcatcaacaccgtgttcgagcgggccctgaaggag
ctgcccggctcgtacaagctgtggtacaactatctcaaaaccctgcgcaagcaggtgaag
ggaaagtgcatcacggacggcgagtacgaggaggtgaacaacgcgttcgagcgagcgctc
gtcttcatgcacaagatgccccgcatctggatggactactgcgcgttcatgaccgcccag
tgcaagataacgcgcacgcggcaggtgtttgatcgggcgctgcgtgccctcccgattacg
cagcaccatcgcatctggccgctgtacttggacttcctcaagcggttcgacatcccggag
acggcggtccgggtgtggcgccgctacctgaagctctgcccggaggacgcggaagagtac
gtggagtttctgcagtcgatcggccatctggacgaggcggcccagcagctggccagcatc
gtggacaacgagcacttcgtgtcgaagcatggcaaatcgaaccaccagctgtggaacgag
ctgtgcgagctgatttccaaaaacccggacaaagtgcactcgctcaatgtggacggcatc
atccgcggtgggctgcgacggtacaccgatcagctcggccacctgtggaactcgctggcc
gggtattacgtgcgcagcgggctgtttgatcgcgcgcgcgatatctacgaggaagcgatc
caaacggtcacgacggtgcgcgactttagccaggtgttcgatgcgtacgcgcagttcgag
gagctaagcctgagcaaggtgatggagctgctggagcgcaacccgaacccgaccgaggat
caggagatcgatgtggagctgcggatggcgcggttcgagtatctgatggagcgccggctg
ctgctgctgaacagtgtgctgctgcgccagaacccgcacaacgtggccgagtggcacaag
cgggtggagctgtacgagggcaagccgcacgaaatcatcaacacctacacggaggcggtc
cacacggtgcagccgaagctggccgtcggcaagctgtacaccctgtgggtggcattcgcc
aagttctacgaaaccaacaagcagctggccgacgcgcgcgtcgtgttcgaaaaggccgtc
caggtggactatctgaaggtggacgagctggccagcgtgtggtgcgagtgggccgagatg
gaaattcgccaggagcagtacgaggaggcgctgcggatcatgcagcgcgcgacggcgatg
ccgaagcgaaaggtggcctaccacgacgacaccgagacggtgcagatgcgcgtgtacaag
tcgctcaagctgtggtcgatgtacgcggatctggaggaaagcttcggcacgttcaagacg
tgcaagcaagtgtacgatcgcatcatcgatctgaagatctgcacgccccagatcatcatc
aactatggcatgtttctcgaggagcacaactacttcgaggaggcgttcaaggcgtacgag
aagggcatcgcgctgttcaagtggcccaacgtgtacgacatctggaacacgtacctgacc
aagttcctgtcccggtacggcggccagaagctggagcgatcgcgcgatctgttcgagcag
tgtctggacggctgcccgcccgagctggccaagaacctgtacctgctgtacgcgaagctg
gaggagcagcacgggctggcccgccatgcgatggccgtgtacgagcgggccacgaccgcc
gtcaaggaggaggaaatgtacgccatgtttaatctgtacatcaagaaggcggccgaaatc
tacggcataccccggacgcgccagatctacgagaaggcgatcgaggtgctgcccgaggcg
gactcgcgcaagatgtgcgtcctgttcgccgagatggaaacgaagctcggggaaatcgat
cgcgcacgggccatctacgcacactgcagccaaatgtgcgatccgcgcgtaacggccgac
ttctggcaaacgtggaaagagttcgaaatccggcacggcaacgaggacacgatgagggaa
atgctgcgcatcaagcgctcgatccaggcgacgtacaacacgcagatcaacatgatgtcg
gcggccctgatcaacgcagccgttacgaccggcgaaccaccgaaggatgcgatgcgtgca
ctggaggtgaaggcggccgaaacgacggcacgtgcgatagcggcggtcggcgcgaccggc
ggcaacattatgtttgtgcggggcgaaacgcagggaggagcggcgaaggaagatcgtgtg
gttaatcccgacgaaattgacatcgacgatgacgaggaggaggacgacgacgacgatgag
actgcgggcgatgaggatggggaggacatcgccaaaaagattccgatcgagcgccaaagc
attccagcgaaggtgtttggcagcttgcgtcgggaggtagaggagaaggaagagaacgat
atggcagagtag
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