Anopheles merus: 121603706
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Entry
121603706 CDS
T08889
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
amer
Anopheles merus
Pathway
amer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amer00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121603706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amer03021
]
121603706
03019 Messenger RNA biogenesis [BR:
amer03019
]
121603706
Transcription machinery [BR:
amer03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121603706
Messenger RNA biogenesis [BR:
amer03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
121603706
U7-dependent histone pre-mRNA processing factors
121603706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT
Motif
Other DBs
NCBI-GeneID:
121603706
NCBI-ProteinID:
XP_041788770
UniProt:
A0A182USV9
LinkDB
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Position
2R:14882392..14886471
Genome browser
AA seq
1190 aa
AA seq
DB search
MENLLRGSSSFSEAAMLFTDEKIASARTKIVEALNEAQHATSGQKCEIIAKVQELLLHTD
VELLNEFLENMLVLAHDPVAEVRKAIAGFIDEICKQHIAMLPKVVGPMFSLLRDSAPVVT
KRVIQGCGSIYRLAIQWICQLDDIPEEVEQAWNTLCLMKISILDMIDHDNDGIRTNAIKF
LEGVVILQTYPDEDSQKRENDFSLEDVPLTMKQIRRRKLEDEATNIFELLLQFHGASHIS
SVNLIACTGTLCTIAKLRPSTMTRVVEALKHLHSNLPPTLTNSQVSSVRKNLKMQFLNLL
KHPASFEHQATIAQILVDLGASNGEITRAIPKLDKREQQRRAKRALENSMASQLAAKRAK
VDGQARKERDDGGTAGESTRDQPRTMEIDYEELNEQKSRSTKQNEQFLLEVLPKTDLVVQ
LVLSNMDKLTEQMLQSAKPAAVLTVEQYIQKIAQTLAAQMSEVKAGPGASAFTKDPPMKV
RISDEEEKSIILSGKRKPVDPSATPLPPSIGEEDLPEGGAGLPEEDEDDEALSEEDRQKL
EATRKLRETLERVKGGTATGEPKLRQRIKMLKLQEITKPLPKATKETFLLDAVVRILKAE
RQALVGGVSMQRNRIITAFGASFINPVRDVIMEHILEDLPKRIELAFSWIFEEYGLMQGF
TRYTHVKHDNGPQYPYTQLLVRLVTNVIERPKDTFRQKESLLKRLYLEAPMLPQELIDML
VRMCELEELVDCGMQIVKDLLIRRPPRERQYLDILLKYAYYENGTIREKAIEYVMSVFAV
HRIMTEDIEKKALVWLAHLENELPPESMFAAEYGRAEHPRTWTEELAKVCLGLFLEVMVY
DQTLLMRFSEVYIKATSEMKRAVIRAIEGPIRKIGSESEELLRLIEQCPKGSETIIIRII
YILTEKSLPSPDLVERVRTLHQTKVSDVRLLIPVINGLTKKEILSALPKLIKLNPGVVKE
VFNRLLGIGVEYGPAELPLTSVELLVALHTIETSKVELKFIVKATSLCLAEKEVYTHDVL
GSVLQQLVEITPLPTLLMRTVIQSLTLHPRLAGFVTNLLQRLILKQVWKQKVVWDGFIKC
AQRLTPQSLGVLIQLPAQQLQDAITICPEFREPMLEHAREIMEHQIGHVSQQVMDVLLGI
SPYSTTESVDLQIVGNYSEEAPMSSHMPVKIKQEKDVEPPAAPTPPQSKE
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctactgcgagggtcgtccagcttcagcgaggctgcgatgctatttaccgac
gaaaagattgccagtgctagaaccaagatcgtcgaagcgctgaacgaggcgcagcatgca
acgagcggccaaaagtgtgaaatcattgccaaagtacaggagctgctcctacacaccgat
gtggaactgttgaacgagtttctggaaaacatgctggtgctcgcgcacgacccggtggcc
gaagtgcggaaagctattgccggctttatagacgaaatctgcaagcagcatatcgcgatg
ctgcccaaggtggtgggtcctatgttttcgctgctgcgcgactcggccccggtcgtgacg
aagcgcgtgatacagggctgcggttcgatctaccggctggcgatccagtggatctgccag
ctggacgacataccggaggaggtggagcaggcctggaacacgctctgtctgatgaagatt
tccatcctggacatgatcgaccacgacaacgacggcatacggacgaatgcgatcaagttc
cttgagggtgtcgtcatcctgcagacctacccggacgaggatagccagaagcgcgagaac
gacttctcgctcgaggacgtgccgctcacgatgaagcagatccgccgccggaagctggag
gacgaagcgaccaacatcttcgagttgttgctacagtttcacggtgcgtcccacatttcc
tcggtgaatctgatcgcctgtaccggcacgctgtgcacgattgcgaagctgcgcccatcc
acgatgacgcgcgtggtcgaggcgctgaaacatctgcactccaacctgccgccaacgctc
accaactcgcaggtcagctcggtacggaagaacctgaagatgcagtttctcaatctgctc
aagcatccggccagcttcgagcaccaggcaacgattgcgcagatactggtcgatctaggt
gcgtcgaacggtgagatcacgcgtgccattccgaagctagacaaacgggagcagcagcgg
cgggcaaaacgtgcactcgaaaactcgatggcatcgcagctcgcggccaagcgtgccaag
gtggacgggcaggcacgaaaggaaagggatgacggcgggacggcgggtgagtcgacgcgc
gatcagccacgcacgatggagatcgattatgaggagctgaacgagcagaagagtcgctcc
accaagcagaacgaacagtttctgctcgaggtgctgccaaagacggacctcgtcgtccag
ctcgtcctctcgaacatggacaagctgaccgaacagatgctgcaaagtgcgaaacccgcc
gccgtactgacggtcgaacagtacatccagaagatcgcccaaacgctggccgcccagatg
agcgaagtgaaggccgggcccggtgcgagcgccttcacgaaagatcccccaatgaaggtg
cgcatcagcgacgaggaggagaaaagtattatcctctccggcaaacggaagccggtcgat
ccgtcggcaacgccactgcctccctcgattggggaggaagatctgccggagggcggtgcc
ggtctaccggaggaggacgaagacgacgaggcactgtcggaggaggaccgtcaaaagctg
gaagcgacccgcaagctgcgcgaaacgctcgaacgcgtcaagggcggtacggcgacgggc
gagccgaagctaaggcagcgcatcaagatgctgaagcttcaggaaatcaccaaaccgctg
ccgaaagcgaccaaggaaacgttcctgctcgacgcggtcgtgcggatactgaaggcggaa
cggcaggccctggtcggtggggtgagcatgcagcggaatcgtatcatcaccgcgttcggg
gcgtccttcatcaacccggtgcgggacgtgattatggagcacatactggaggatctgccg
aagcgcatcgagctggcgttttcctggatcttcgaagagtacgggctgatgcaggggttc
acgcgctacacgcacgtcaagcacgacaatgggccgcagtatccgtacacgcagctgctg
gtgcgcctcgtcacgaacgtgatcgagcggccgaaggatacgttccgccagaaggaatct
ctgctcaagcggctctacctggaggcgccgatgctgccccaggagctgatcgatatgctc
gtgcggatgtgtgagctggaggagctggtcgattgtggcatgcagatcgtgaaggatttg
ctgatccggcggccaccgagggagaggcagtatttggacattctgctcaagtacgcgtac
tacgagaatgggacgatccgggagaaagcgatcgagtacgtgatgagcgtgtttgccgtg
caccgcatcatgacggaggacatcgagaagaaggcgctcgtctggttggcccatctggag
aacgagctgccgccggagtcgatgtttgcggccgagtacggccgggcggaacatccgcgc
acgtggacggaggagctggcgaaggtttgtctgggcctgtttctggaggtgatggtgtac
gatcagacgctgctcatgcgcttctcggaggtgtacattaaggcgacgtcggagatgaag
cgcgccgtgatacgggcgatcgagggcccgatccggaagattggctccgaaagcgaggag
ctgctgcggctgatcgaacagtgcccgaagggctcggaaacgatcatcatacgcatcatc
tacatcctcacggagaaatcccttccttcgccggacctggtagagcgtgtgcgcaccctg
caccaaacgaaggtatccgacgtgcgattgctcatccccgtcatcaatgggctgacgaag
aaggagatcctatcggcactgcccaaactgatcaaactgaacccgggcgtcgtcaaggag
gtgttcaatcgactcctgggcatcggcgtcgagtacgggccggccgagctgccgctcacc
tcggtcgagctgctcgtcgccctgcacacgatcgagacgagcaaggtggagctgaagttt
atcgtgaaggcaacctccctgtgcctggccgagaaggaagtgtacacgcacgatgtgttg
gggagtgtgctgcagcagctggtcgagattacgccgctaccaacgctgctgatgcgcacg
gtgatccagtcgctaacgcttcacccgcggctggccggcttcgtgacgaacctgctgcag
cgactcatcctcaagcaggtgtggaagcagaaggtggtgtgggatggcttcatcaagtgc
gcccagcgcctgacgccccaaagcctcggtgtgttgatacagctgccggcgcagcagctg
caggacgcgatcaccatctgtcccgagttccgcgagccgatgctggagcatgcgcgcgaa
atcatggagcaccagattgggcacgtgtcgcagcaggtgatggacgtgctgctcggcatc
tcgccctactcgacgacggaatcggtcgacctacagattgttggtaactacagcgaagag
gcgccaatgtcctcccacatgccggtgaaaattaagcaggaaaaggatgtggaaccacct
gccgctccaacaccgccgcaaagcaaggagtag
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