Anaplasma marginale Florida: AMF_006
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Entry
AMF_006 CDS
T00855
Symbol
ihfA
Name
(GenBank) presumptive integration host factor alpha-subunit (ihfA)
KO
K04764
integration host factor subunit alpha
Organism
amf
Anaplasma marginale Florida
Brite
KEGG Orthology (KO) [BR:
amf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amf03032
]
AMF_006 (ihfA)
03036 Chromosome and associated proteins [BR:
amf03036
]
AMF_006 (ihfA)
03400 DNA repair and recombination proteins [BR:
amf03400
]
AMF_006 (ihfA)
DNA replication proteins [BR:
amf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AMF_006 (ihfA)
Chromosome and associated proteins [BR:
amf03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AMF_006 (ihfA)
DNA repair and recombination proteins [BR:
amf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AMF_006 (ihfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ACM48905
UniProt:
B9KHE3
LinkDB
All DBs
Position
4258..4554
Genome browser
AA seq
98 aa
AA seq
DB search
MAQTLTRARLADEINREIGISREDALVLVGEILDEMVSSLVRGGLLKISSFGTFKVIRKK
ERIGRNPKTLEQFIVKEHNTVTFCPSVTMKRLINGEES
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggctcagacgcttacgagggctcggcttgctgacgagattaacagagaaatcggtata
tcgcgcgaggatgcgctagtactggttggggagatacttgacgagatggtgtcgtccctg
gtcagagggggcctgttaaagatatcttcgtttggcacattcaaggtgataagaaagaaa
gagcgcattggcaggaacccaaaaactttggagcagtttatagtgaaggaacataacacc
gttacgttttgtccatcggtaacgatgaagcgcctgatcaacggcgaagaatcgtga
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