Anaplasma marginale Florida: AMF_045
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Entry
AMF_045 CDS
T00855
Symbol
rho
Name
(GenBank) transcription termination factor rho (rho)
KO
K03628
transcription termination factor Rho
Organism
amf
Anaplasma marginale Florida
Pathway
amf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMF_045 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amf03021
]
AMF_045 (rho)
03019 Messenger RNA biogenesis [BR:
amf03019
]
AMF_045 (rho)
Transcription machinery [BR:
amf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AMF_045 (rho)
Messenger RNA biogenesis [BR:
amf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AMF_045 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
OB_RNB
AAA
ATPase_2
NACHT
AAA_22
DnaB_C
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ACM48940
UniProt:
B9KHH8
LinkDB
All DBs
Position
43589..44953
Genome browser
AA seq
454 aa
AA seq
DB search
MFNKNKRRSRSYSSKPATERSAEHRTPSEGGRVLNLCELKQKSTEELLVTAEELGVVSNG
RMLKQEIIFQLMKRVISEGGIAIGGGVVETLPDGFGFLRSAKANYAASSDDIYISAGQIK
KFNLRTGDIVSGEIRAPGEKERYFTLVKAYSINYTEIGKLQRYVHFDDLIPLYPEERILL
ECKESFGGEKKDISMRAIDIIAPLGKGQRALIVAPPRVGKTVILQQIAHSIAMNHPNMEL
IVLLIGERPEEVTDMLRSVKGEVVSSTFDEPAYRHVQLAEIVIERAKRMVEHKKEVVILL
DSITRLARAYNEVMPSSGKVLTGGVDSNALQRPKRFFGAARNIENGGSLTIIATALIETG
SKMDEVIFEEFKGTGNCEIILDRKIADKRIYPAIDISKSGTRKEDMLIESAFLKKVWLLR
RLLSAMGPVEAMEFLRDKLSIAKDNNDFFEMMNS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaacaagaataagagaaggtccaggtcttattcctccaagccggcgaccgaaaga
agtgcggagcatcgcaccccctccgaaggagggagggtactgaacctgtgtgaactgaag
caaaagagcacggaggagttactggtaacagcagaggagttgggagtagtcagcaacgga
aggatgctgaagcaggagataattttccagctaatgaagcgagttatcagtgaaggaggc
atagctatcggaggtggagtagtagagacactacctgacgggtttgggtttttaagatca
gccaaggctaactatgcagcaagcagtgatgatatctacatatctgcaggccagatcaag
aagttcaatttaagaacaggagacatagtaagtggcgagatcagagcacctggggagaag
gagagatacttcacactggtcaaggcatatagcataaactacacagagataggaaagcta
cagaggtacgtacactttgacgatctgattccactataccctgaggagaggattttactc
gaatgcaaagagagttttggaggggagaagaaagacatcagcatgcgcgcaatagacatc
atagccccactgggcaaaggtcagcgtgcactgattgtagcaccacctagggtgggcaag
acggtaattttgcagcagattgcacactccattgccatgaatcacccaaacatggagttg
atagtcctgctcataggagaacggcctgaggaagttacagacatgctgaggtcagtaaaa
ggagaagtagtgagctccacatttgatgagccagcatataggcacgtacaactggctgaa
atagtaattgagcgggctaagaggatggtagaacacaagaaggaagttgtgatactacta
gactcaatcaccagattggcccgtgcgtacaatgaggtcatgccatcatctggtaaggta
ctaactggtggggtagattccaacgcattgcaaagacccaagaggttcttcggagctgca
aggaacatcgagaatggcgggtcactcaccatcattgcaacagcactgattgaaactggt
tcaaagatggatgaagtcatctttgaagaattcaagggtacaggtaactgtgaaataatc
ctagacaggaaaatcgcagacaagagaatctaccctgcgattgatatttctaaatctggg
actcgtaaggaagacatgctgatagagagtgcatttttgaagaaggtatggctactcaga
aggttactatcagcaatgggtccagtagaagccatggagttcctgcgagacaagctaagc
atcgccaaggacaacaatgacttctttgagatgatgaacagctaa
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integrated database retrieval system
