Anaplasma marginale Florida: AMF_672
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Entry
AMF_672 CDS
T00855
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain (rpoA)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
amf
Anaplasma marginale Florida
Pathway
amf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AMF_672 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amf03021
]
AMF_672 (rpoA)
03400 DNA repair and recombination proteins [BR:
amf03400
]
AMF_672 (rpoA)
Enzymes [BR:
amf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AMF_672 (rpoA)
Transcription machinery [BR:
amf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AMF_672 (rpoA)
DNA repair and recombination proteins [BR:
amf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AMF_672 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
IDH
Motif
Other DBs
NCBI-ProteinID:
ACM49509
UniProt:
B9KJ47
LinkDB
All DBs
Position
complement(821981..823081)
Genome browser
AA seq
366 aa
AA seq
DB search
MAISDNGGGSVGLCYGSEFSISDHWDKLTRPSSIKVVGDGDLSRSAELIVEPLESGFALT
LGNALRRVMMSSLRGFAVYGIEVEGVSHELTSLSGVREDVADLVLNLSMLRVKLLTSESR
VLRLVAKGPGEITAAAIGDSEGCVVLNKDLHICTLGKDVDFSMKIYVNSGKGYVPASEYR
AASRSGATSEVGPGFIATNALYSPVKKVAFRIESSRIGQFTDYDRLVISVETDGSISPDE
AVAVSARVLQDQLQSFIGSEEVEGESRKKVDKEEGALPYDHNLLRKVDELELSVRSHNCL
KNDNITYIGDLVQKTESDMLRTPNFGRKSLNEINEVLASMNLHLGMKVPNWPPESIENLS
KQYSED
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttctgataatggggggggctccgttggcttgtgttatggtagcgagttctcg
atctctgatcactgggataaactgaccagaccttcttccataaaggttgtgggtgatggc
gatctatcgcgctctgccgagctaattgtagagcccctggagagtgggtttgccctcacc
ttgggcaacgcgctcaggcgtgttatgatgtcttccctaagagggttcgctgtgtacggg
atagaggttgagggcgtgtcgcacgaactcacgtctctatctggggttcgggaagatgtt
gcggatttggtgctcaacctgagtatgttgagggtaaagcttttgacttctgaatccagg
gttctgcgtctcgttgctaaaggccccggggagatcactgcagctgctataggtgactcc
gaggggtgcgtggttctaaacaaggatttgcatatctgcaccttgggtaaagatgttgac
ttcagcatgaagatatatgtgaacagcggaaagggctatgttcccgcttctgagtacagg
gctgcctccagatctggcgctaccagcgaagttggcccggggttcattgccaccaacgcg
ctctatagtccggtaaaaaaggttgcattcaggatcgagagtagcaggataggccagttt
actgactacgataggcttgttatctctgttgagacggatggctctatatctccggacgaa
gctgtggccgtttctgccagggtgctgcaggatcagctgcagtcattcataggctctgag
gaagttgagggagaatccaggaagaaggttgacaaagaagagggggcgttaccctacgat
cataatctgctgcgcaaggttgatgagctagagctttctgtaaggtcccacaactgcttg
aaaaatgacaacataacgtatataggtgacctcgtgcagaaaacagagtctgacatgttg
cgtactcccaactttggtagaaagtctctgaatgagataaatgaggtcttggctagcatg
aaccttcaccttggcatgaaggttccgaattggccgcctgagtctattgagaatcttagt
aagcagtatagtgaggattag
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