Anaplasma marginale Florida: AMF_856
Help
Entry
AMF_856 CDS
T00855
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease (recJ)
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
amf
Anaplasma marginale Florida
Pathway
amf03410
Base excision repair
amf03430
Mismatch repair
amf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMF_856 (recJ)
03430 Mismatch repair
AMF_856 (recJ)
03440 Homologous recombination
AMF_856 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amf03400
]
AMF_856 (recJ)
DNA repair and recombination proteins [BR:
amf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AMF_856 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AMF_856 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AMF_856 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ACM49687
UniProt:
B9KGY3
LinkDB
All DBs
Position
1026006..1027766
Genome browser
AA seq
586 aa
AA seq
DB search
MQDVIEATDAALEYVGVGGATWRVCEVPCRDVTTIMQRFGICEVVARVLATRGIPIEEME
NFLFPTLRLLLPDPFHLLDMDKAVARIHDAIRNGESIAIFGDYDVDGATSSAMLCRYLRG
LEVHTKIYIPDRVEEGYGPNSAAMLKLREEGYSLCITVDCGTLAYEPILAARSVNLDVIV
VDHHIGINTLPKAVAVVNPNRLDESSEHTYLSAVGTSFLLLVALQKTLREAGVFAHRSEP
DLMNYLDLVALGTVCDVMPMIKLNRAMVRHGLKVISARSNVGLRVLGDAIGIEEKISVYH
LGFSIGPHINAGGRVGNASLGASLLSSDDESECERISYMLLSLNAERKELEKRSLEEALH
QAERLVAAGNNVIMVAGTWHVGVIGIVASRLKERFHLPSIVVSLSGNLGKASARSVSGID
IGAAVLAAKLEQLIPEGGGHAMAAGFSVCADKLEALYSFFLERFKHSDIQKVSYACGILT
AGAVNFPLWRELQMLEPFGPGNPEPRFILKNVEIRKPEVMGGSHVRCLISGDNALVKGVC
FKCIGTELGTTLLQRGRCVHLLGKISVNQWRGNEYVQFVIDDAALP
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagatgtaatagaagcaacagacgcggcactggagtacgttggtgttggaggggca
acgtggagggtctgtgaagtaccctgccgggacgtaacaacaattatgcagcgcttcggg
atttgtgaagtggtagccagggtgttggcaactcgcggtatccccatagaagagatggaa
aattttttgtttcctaccctgaggctcctgctgccggatccgtttcacctgctagacatg
gacaaagccgtagcgaggatacacgatgcaatacgcaatggggagagcatcgcaattttc
ggcgactacgacgttgatggcgcaacatcctctgccatgttgtgtagatacctgcgtggc
ctggaggtacacacaaaaatttacatccctgaccgcgttgaagagggctacggaccaaac
tccgccgcaatgttaaaactacgtgaggaaggttatagcctctgtattaccgtagactgc
ggcacgttggcctacgaacccatattagcagcacggtctgtaaaccttgatgtcatagtc
gtcgaccaccacattggaataaacaccctgcccaaggccgttgcggtagtgaatccgaac
agactggacgaatcctctgagcatacatacctgtcggccgttggtacatcttttttgctg
ttagtggcactacaaaaaaccctgagagaagcgggggtttttgcgcacagaagcgagcca
gatctcatgaactacctcgacttggttgcgctgggcaccgtttgcgatgttatgccaatg
ataaagctcaacagagcaatggtcaggcacggactgaaggtgatatccgcccggagtaac
gtggggcttagagtgctcggagacgccattgggatagaggaaaagatcagcgtttatcac
ctgggctttagcatagggccacatataaatgccggggggcgggtcggcaacgcaagcctg
ggagccagccttttgtctagtgatgacgagagcgagtgcgagagaatatcctacatgctg
ctgagcttgaatgctgaaagaaaagagctggaaaagcggagtttggaagaagcgttgcac
caagcagagcggttagtcgcagcaggtaataatgtcatcatggttgcgggcacctggcac
gtgggcgtaataggaattgtggcgagcaggcttaaggagagattccatctaccatcaata
gtggtttcgctaagcggaaatctcggcaaggcgagcgccagatccgttagcggtattgat
ataggagcggcagtgctcgcagcaaaacttgagcagttaatacctgagggcggtggacat
gctatggccgcgggattttcagtgtgcgcagacaagcttgaggcattgtactcgttcttc
ttggaaaggtttaagcactccgacatacagaaagtctcgtatgcttgcggcatattaacc
gcaggggccgtgaactttccactgtggagggagctgcaaatgctggaaccgttcggccca
ggaaatccagagcctagattcatccttaaaaatgtagaaatcagaaaacccgaagtcatg
ggtggcagccacgttaggtgcctaatatccggtgacaatgcacttgttaagggcgtgtgc
ttcaagtgcataggcacagaactgggcacaacgcttctgcagcgcgggcgatgcgttcat
ctgctcggcaaaatcagcgtaaaccagtggcggggaaatgagtacgtgcagttcgtcata
gacgatgcggcattgccgtag
DBGET
integrated database retrieval system
